RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 MAPRE1Q15691 268 aaKnown RBP20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 FAM102AQ5T9C2 384 aaPredicted RBP20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 OLFML1Q6UWY5 402 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 ZMIZ2Q8NF64 920 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 SMARCD1Q96GM5 515 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 HTATIP2Q9BUP3 242 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 TUBB2BQ9BVA1 445 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 ZCWPW1Q9H0M4 648 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 CYLDQ9NQC7 956 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 PROSCO94903 275 aa20.53■□□□□ 0.88
EFCAB11-202ENST00000538485 BDNFP23560 247 aa20.53■□□□□ 0.88
EFCAB11-202ENST00000538485 RABGGTBP53611 331 aa20.53■□□□□ 0.88
EFCAB11-202ENST00000538485 CTXN3Q4LDR2 81 aa20.53■□□□□ 0.88
EFCAB11-202ENST00000538485 DAB2IPQ5VWQ8 1189 aa20.53■□□□□ 0.88
EFCAB11-202ENST00000538485 PSRC1Q6PGN9 363 aaPredicted RBP20.53■□□□□ 0.88
EFCAB11-202ENST00000538485 EMC1Q8N766 993 aa20.53■□□□□ 0.88
EFCAB11-202ENST00000538485 CD101Q93033 1021 aa20.53■□□□□ 0.88
EFCAB11-202ENST00000538485 VN1R3Q9BXE9 311 aa20.53■□□□□ 0.88
EFCAB11-202ENST00000538485 CHD7Q9P2D1 2997 aa20.53■□□□□ 0.88
EFCAB11-202ENST00000538485 PTPRDP23468 1912 aa20.52■□□□□ 0.88
EFCAB11-202ENST00000538485 KCNK3O14649 394 aa20.52■□□□□ 0.88
EFCAB11-202ENST00000538485 SPOPO43791 374 aa20.52■□□□□ 0.88
EFCAB11-202ENST00000538485 LCP1P13796 627 aa20.52■□□□□ 0.88
EFCAB11-202ENST00000538485 SNX16P57768 344 aa20.52■□□□□ 0.88
EFCAB11-202ENST00000538485 SLC39A12Q504Y0 691 aa20.52■□□□□ 0.88
EFCAB11-202ENST00000538485 RNF168Q8IYW5 571 aaPredicted RBP20.52■□□□□ 0.88
EFCAB11-202ENST00000538485 CLEC4CQ8WTT0 213 aa20.52■□□□□ 0.88
EFCAB11-202ENST00000538485 CAPZA3Q96KX2 299 aa20.52■□□□□ 0.88
EFCAB11-202ENST00000538485 TTPALQ9BTX7 342 aa20.52■□□□□ 0.88
EFCAB11-202ENST00000538485 CARD6Q9BX69 1037 aa20.52■□□□□ 0.88
EFCAB11-202ENST00000538485 CSNK1G1Q9HCP0 422 aa20.52■□□□□ 0.88
EFCAB11-202ENST00000538485 IP6K2Q9UHH9 426 aa20.52■□□□□ 0.88
EFCAB11-202ENST00000538485 CEP290O15078 2479 aa20.52■□□□□ 0.88
EFCAB11-202ENST00000538485 DDX3YO15523 660 aaKnown RBP20.52■□□□□ 0.87
EFCAB11-202ENST00000538485 CAPN15O75808 1086 aa20.52■□□□□ 0.87
EFCAB11-202ENST00000538485 ACADSBP45954 432 aa20.52■□□□□ 0.87
EFCAB11-202ENST00000538485 SLC6A3Q01959 620 aa20.52■□□□□ 0.87
EFCAB11-202ENST00000538485 TAF5Q15542 800 aa20.52■□□□□ 0.87
EFCAB11-202ENST00000538485 ZNF280DQ6N043 979 aa20.52■□□□□ 0.87
EFCAB11-202ENST00000538485 RSPO2Q6UXX9 243 aaPredicted RBP20.52■□□□□ 0.87
EFCAB11-202ENST00000538485 CREG2Q8IUH2 290 aa20.52■□□□□ 0.87
EFCAB11-202ENST00000538485 LRRN4CLQ8ND94 238 aa20.52■□□□□ 0.87
EFCAB11-202ENST00000538485 KCTD13Q8WZ19 329 aa20.52■□□□□ 0.87
EFCAB11-202ENST00000538485 KRT35Q92764 455 aa20.52■□□□□ 0.87
EFCAB11-202ENST00000538485 ZNF558Q96NG5 402 aa20.52■□□□□ 0.87
EFCAB11-202ENST00000538485 TMEM59LQ9UK28 342 aa20.52■□□□□ 0.87
EFCAB11-202ENST00000538485 GRAP2O75791 330 aa20.51■□□□□ 0.87
EFCAB11-202ENST00000538485 SLC1A1P43005 524 aa20.51■□□□□ 0.87
EFCAB11-202ENST00000538485 RNASE9P60153 205 aaKnown RBP20.51■□□□□ 0.87
EFCAB11-202ENST00000538485 HTRA4P83105 476 aaPredicted RBP20.51■□□□□ 0.87
EFCAB11-202ENST00000538485 ADIGQ0VDE8 80 aa20.51■□□□□ 0.87
EFCAB11-202ENST00000538485 WHAMMP3Q1A5X7 153 aa20.51■□□□□ 0.87
EFCAB11-202ENST00000538485 ZDHHC17Q8IUH5 632 aa20.51■□□□□ 0.87
EFCAB11-202ENST00000538485 SLC39A11Q8N1S5 342 aa20.51■□□□□ 0.87
EFCAB11-202ENST00000538485 KHSRPQ92945 711 aaKnown RBP eCLIP20.51■□□□□ 0.873e-8■■■■□ 25.7
EFCAB11-202ENST00000538485 F8VP50 259 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 TBC1D4O60343 1298 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 LAG3P18627 525 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 MARCKSL1P49006 195 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 C4orf50Q6ZRC1 276 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 SPATA2LQ8IUW3 424 aaPredicted RBP20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 DCP1BQ8IZD4 617 aaKnown RBP20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 COLGALT1Q8NBJ5 622 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 FNIP1Q8TF40 1166 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 ALG3Q92685 438 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 OR6C75A6NL08 312 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 MIF4GDA9UHW6 222 aaKnown RBP20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 HHLA1C9JL84 531 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 SLU7O95391 586 aaKnown RBP20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 CYP2F1P24903 491 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 NDUFV1P49821 464 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 PEX5P50542 639 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 USP41Q3LFD5 358 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 DCAF12L1Q5VU92 463 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 TRNP1Q6NT89 227 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 PRSS55Q6UWB4 352 aaPredicted RBP20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 ANKS3Q6ZW76 656 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 GPRIN1Q7Z2K8 1008 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 HERVK_113Q902F9 699 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 DPF3Q92784 378 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 MS4A14Q96JA4 679 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 LRRC4Q9HBW1 653 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 CHST7Q9NS84 486 aa20.5■□□□□ 0.87
EFCAB11-202ENST00000538485 CDH23Q9H251 3354 aa20.49■□□□□ 0.87
EFCAB11-202ENST00000538485 CHD9Q3L8U1 2897 aa20.49■□□□□ 0.87
EFCAB11-202ENST00000538485 PDE2AO00408 941 aaPredicted RBP20.49■□□□□ 0.87
EFCAB11-202ENST00000538485 MAN1A1P33908 653 aa20.49■□□□□ 0.87
EFCAB11-202ENST00000538485 CTNNA1P35221 906 aaKnown RBP20.49■□□□□ 0.87
EFCAB11-202ENST00000538485 FLT3P36888 993 aa20.49■□□□□ 0.87
EFCAB11-202ENST00000538485 ADCY1Q08828 1119 aa20.49■□□□□ 0.87
EFCAB11-202ENST00000538485 PIGHQ14442 188 aaPredicted RBP20.49■□□□□ 0.87
EFCAB11-202ENST00000538485 CFAP221Q4G0U5 840 aa20.49■□□□□ 0.87
EFCAB11-202ENST00000538485 COL13A1Q5TAT6 717 aaPredicted RBP20.49■□□□□ 0.87
EFCAB11-202ENST00000538485 TMEM169Q96HH4 297 aa20.49■□□□□ 0.87
EFCAB11-202ENST00000538485 ABHD8Q96I13 439 aa20.49■□□□□ 0.87
EFCAB11-202ENST00000538485 ZBED2Q9BTP6 218 aa20.49■□□□□ 0.87
EFCAB11-202ENST00000538485 UBXN6Q9BZV1 441 aa20.49■□□□□ 0.87
EFCAB11-202ENST00000538485 DMAP1Q9NPF5 467 aaPredicted RBP20.49■□□□□ 0.87
EFCAB11-202ENST00000538485 ABI2Q9NYB9 513 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 618.3 ms