RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 RCBTB1Q8NDN9 531 aa4.73□□□□□ -1.65
SNHG1-208ENST00000538266 DNAJB3Q8WWF6 145 aa4.73□□□□□ -1.65
SNHG1-208ENST00000538266 PSPC1Q8WXF1 523 aaKnown RBP4.73□□□□□ -1.65
SNHG1-208ENST00000538266 RAD54LQ92698 747 aa4.73□□□□□ -1.65
SNHG1-208ENST00000538266 KIFAP3Q92845 792 aa4.73□□□□□ -1.65
SNHG1-208ENST00000538266 C1orf159Q96HA4 380 aa4.73□□□□□ -1.65
SNHG1-208ENST00000538266 NLRP4Q96MN2 994 aa4.73□□□□□ -1.65
SNHG1-208ENST00000538266 DIRC2Q96SL1 478 aa4.73□□□□□ -1.65
SNHG1-208ENST00000538266 LBHD1Q9BQE6 289 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-208ENST00000538266 DHRS4Q9BTZ2 278 aa4.73□□□□□ -1.65
SNHG1-208ENST00000538266 TIPINQ9BVW5 301 aa4.73□□□□□ -1.65
SNHG1-208ENST00000538266 POLR3FQ9H1D9 316 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-208ENST00000538266 TNMDQ9H2S6 317 aa4.73□□□□□ -1.65
SNHG1-208ENST00000538266 ZHX3Q9H4I2 956 aa4.73□□□□□ -1.65
SNHG1-208ENST00000538266 DHX33Q9H6R0 707 aaKnown RBP4.73□□□□□ -1.65
SNHG1-208ENST00000538266 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.73□□□□□ -1.65
SNHG1-208ENST00000538266 ZKSCAN5Q9Y2L8 839 aa4.73□□□□□ -1.65
SNHG1-208ENST00000538266 RWDD3Q9Y3V2 267 aa4.73□□□□□ -1.65
SNHG1-208ENST00000538266 RNF114Q9Y508 228 aa4.73□□□□□ -1.65
SNHG1-208ENST00000538266 PCDHA2Q9Y5H9 948 aa4.73□□□□□ -1.65
SNHG1-208ENST00000538266 TIMM13Q9Y5L4 95 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-208ENST00000538266 A0A087X0B3 334 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 BLACEA4D250 179 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 OR14I1A6ND48 311 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 LRRIQ4A6NIV6 560 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 RSPH10B2B2RC85 870 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 H0YCG3 227 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 DYNC1I1O14576 645 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 KIAA0355O15063 1070 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 HIP1RO75146 1068 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 MAFO75444 373 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-208ENST00000538266 ZNF202O95125 648 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 STBD1O95210 358 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 PARNO95453 639 aaKnown RBP4.72□□□□□ -1.65
SNHG1-208ENST00000538266 VTNP04004 478 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 FUCA1P04066 466 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 MPOP05164 745 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 RSPH10BP0C881 870 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 SRGAP2CP0DJJ0 459 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 CKBP12277 381 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 LCP1P13796 627 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 IDEP14735 1019 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 CYP11B2P19099 503 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 TACR1P25103 407 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 LTBRP36941 435 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 NDUFA8P51970 172 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 SLC12A3P55017 1021 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 NLRP11P59045 1033 aaKnown RBP4.72□□□□□ -1.65
SNHG1-208ENST00000538266 ASIC1P78348 528 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 ADAM17P78536 824 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 MRPS6P82932 125 aaKnown RBP4.72□□□□□ -1.65
SNHG1-208ENST00000538266 NCBP1Q09161 790 aaKnown RBP4.72□□□□□ -1.65
SNHG1-208ENST00000538266 TMEM62Q0P6H9 643 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 KCNAB2Q13303 367 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 KIZQ2M2Z5 673 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 ZC3H12BQ5HYM0 836 aaKnown RBP4.72□□□□□ -1.65
SNHG1-208ENST00000538266 ODR4Q5SWX8 454 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 RINT1Q6NUQ1 792 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 SASS6Q6UVJ0 657 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 CEP68Q76N32 757 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 LRRC8DQ7L1W4 858 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 KCNK18Q7Z418 384 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 RPAINQ86UA6 219 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 ZNF410Q86VK4 478 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 KIAA0319LQ8IZA0 1049 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 TMEM199Q8N511 208 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 SYT2Q8N9I0 419 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-208ENST00000538266 USP38Q8NB14 1042 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 RNF149Q8NC42 400 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 CNNM3Q8NE01 707 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 DEPTORQ8TB45 409 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 GPT2Q8TD30 523 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 THAP3Q8WTV1 239 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-208ENST00000538266 CCDC47Q96A33 483 aaKnown RBP4.72□□□□□ -1.65
SNHG1-208ENST00000538266 TMEM143Q96AN5 459 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 ZBTB10Q96DT7 871 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 IFT74Q96LB3 600 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 PPP1R16BQ96T49 567 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 REEP2Q9BRK0 252 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 GCOM2Q9BZD3 368 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-208ENST00000538266 TSPY26PQ9H489 355 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 GOLPH3LQ9H4A5 285 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 NSUN3Q9H649 340 aaKnown RBP4.72□□□□□ -1.65
SNHG1-208ENST00000538266 C17orf75Q9HAS0 396 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 BLOC1S4Q9NUP1 217 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 LARSQ9P2J5 1176 aaKnown RBP4.72□□□□□ -1.65
SNHG1-208ENST00000538266 SUCLA2Q9P2R7 463 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-208ENST00000538266 KCNG1Q9UIX4 513 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 TBX21Q9UL17 535 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 ODF2LQ9ULJ1 636 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 HPSEQ9Y251 543 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 COL4A3BPQ9Y5P4 624 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 NPFFR2Q9Y5X5 522 aa4.72□□□□□ -1.65
SNHG1-208ENST00000538266 TANC1Q9C0D5 1861 aa4.71□□□□□ -1.66
SNHG1-208ENST00000538266 UQCRHLA0A096LP55 91 aa4.71□□□□□ -1.66
SNHG1-208ENST00000538266 IGKV6-21A0A0C4DH24 114 aa4.71□□□□□ -1.66
SNHG1-208ENST00000538266 FAM237AA0A1B0GTK4 181 aa4.71□□□□□ -1.66
SNHG1-208ENST00000538266 CCDC169A6NNP5 214 aa4.71□□□□□ -1.66
SNHG1-208ENST00000538266 ASAP2O43150 1006 aa4.71□□□□□ -1.66
SNHG1-208ENST00000538266 ERLIN2O94905 339 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms