RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 USP13Q92995 863 aaPredicted RBP8.94□□□□□ -0.98
SPARC-208ENST00000538026 ZFYVE19Q96K21 471 aa8.94□□□□□ -0.98
SPARC-208ENST00000538026 C8orf48Q96LL4 319 aa8.94□□□□□ -0.98
SPARC-208ENST00000538026 TSG101Q99816 390 aa8.94□□□□□ -0.98
SPARC-208ENST00000538026 ZSWIM1Q9BR11 485 aa8.94□□□□□ -0.98
SPARC-208ENST00000538026 SRRTQ9BXP5 876 aaKnown RBP8.94□□□□□ -0.98
SPARC-208ENST00000538026 FOXQ1Q9C009 403 aa8.94□□□□□ -0.98
SPARC-208ENST00000538026 NIF3L1Q9GZT8 377 aa8.94□□□□□ -0.98
SPARC-208ENST00000538026 RNF38Q9H0F5 515 aa8.94□□□□□ -0.98
SPARC-208ENST00000538026 CYP3A43Q9HB55 503 aa8.94□□□□□ -0.98
SPARC-208ENST00000538026 ZFP14Q9HCL3 533 aa8.94□□□□□ -0.98
SPARC-208ENST00000538026 ARMCX3Q9UH62 379 aaPredicted RBP8.94□□□□□ -0.98
SPARC-208ENST00000538026 MAGED2Q9UNF1 606 aaPredicted RBP8.94□□□□□ -0.98
SPARC-208ENST00000538026 GVINP1Q7Z2Y8 2422 aa8.94□□□□□ -0.98
SPARC-208ENST00000538026 SPTBN4Q9H254 2564 aa8.94□□□□□ -0.98
SPARC-208ENST00000538026 SDK1Q7Z5N4 2213 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 FAM92AA1XBS5 289 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 ZNF840PA6NDX5 716 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 CALCAP01258 141 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 CSH1P0DML2 217 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 CSH2P0DML3 217 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 CD58P19256 250 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 AOC1P19801 751 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 CDC25CP30307 473 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 GDI1P31150 447 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 CLCN5P51795 746 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 RPL10AP62906 217 aaKnown RBP8.93□□□□□ -0.98
SPARC-208ENST00000538026 PAK1Q13153 545 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 VEPH1Q14D04 833 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 MAPRE1Q15691 268 aaKnown RBP8.93□□□□□ -0.98
SPARC-208ENST00000538026 DCAF17Q5H9S7 520 aaPredicted RBP8.93□□□□□ -0.98
SPARC-208ENST00000538026 ASTLQ6HA08 431 aaPredicted RBP8.93□□□□□ -0.98
SPARC-208ENST00000538026 RBM43Q6ZSC3 357 aaKnown RBP8.93□□□□□ -0.98
SPARC-208ENST00000538026 UNC93AQ86WB7 457 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 CMTM8Q8IZV2 173 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 FLCNQ8NFG4 579 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 PHOX2BQ99453 314 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 HNRNPABQ99729 332 aaKnown RBP8.93□□□□□ -0.98
SPARC-208ENST00000538026 FAM83CQ9BQN1 747 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 GTPBP4Q9BZE4 634 aaKnown RBP8.93□□□□□ -0.98
SPARC-208ENST00000538026 GPR88Q9GZN0 384 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 TBC1D17Q9HA65 648 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 CSNK1G1Q9HCP0 422 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 ARHGEF3Q9NR81 526 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 HEBP1Q9NRV9 189 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 CISHQ9NSE2 258 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 FAM49BQ9NUQ9 324 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 RWDD2AQ9UIY3 292 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 OTOGLQ3ZCN5 2332 aa8.93□□□□□ -0.98
SPARC-208ENST00000538026 FANCMQ8IYD8 2048 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 AP1G2O75843 785 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 GABBR2O75899 941 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 DCNP07585 359 aaKnown RBP8.92□□□□□ -0.98
SPARC-208ENST00000538026 ZDHHC11BP0C7U3 371 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 PSMC3P17980 439 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 PPP1R2P41236 205 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 SOX9P48436 509 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 APBA1Q02410 837 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 TNK2Q07912 1038 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 KCNH2Q12809 1159 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 LRMPQ12912 555 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 TAF10Q12962 218 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 STIM1Q13586 685 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 MLF2Q15773 248 aaPredicted RBP8.92□□□□□ -0.98
SPARC-208ENST00000538026 ZNF394Q53GI3 561 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 PPP1R26Q5T8A7 1209 aaPredicted RBP8.92□□□□□ -0.98
SPARC-208ENST00000538026 TCERG1LQ5VWI1 586 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 PHLDB3Q6NSJ2 640 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 TXNDC11Q6PKC3 985 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 CLEC20AQ6ZU45 233 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 DENND5BQ6ZUT9 1274 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 ARHGEF19Q8IW93 802 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 MAML2Q8IZL2 1156 aaPredicted RBP8.92□□□□□ -0.98
SPARC-208ENST00000538026 WBP2Q969T9 261 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 CEP295NLQ96MC4 621 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 KREMEN1Q96MU8 473 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 TRMT61BQ9BVS5 477 aaKnown RBP8.92□□□□□ -0.98
SPARC-208ENST00000538026 SLITRK6Q9H5Y7 841 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 METTL14Q9HCE5 456 aaKnown RBP8.92□□□□□ -0.98
SPARC-208ENST00000538026 TRPV5Q9NQA5 729 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 HPS4Q9NQG7 708 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 OSER1Q9NX31 292 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 CHORDC1Q9UHD1 332 aaPredicted RBP8.92□□□□□ -0.98
SPARC-208ENST00000538026 FBXL21Q9UKT6 434 aa8.92□□□□□ -0.98
SPARC-208ENST00000538026 MYO16Q9Y6X6 1858 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 TULP2O00295 520 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 TRIM66O15016 1216 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 CHADO15335 359 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 FGF19O95750 216 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 OLFM2O95897 454 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 OAS1P00973 400 aaKnown RBP8.91□□□□□ -0.98
SPARC-208ENST00000538026 P4HA1P13674 534 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 TARSP26639 723 aaKnown RBP8.91□□□□□ -0.98
SPARC-208ENST00000538026 HOXC13P31276 330 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 MAP3K7CLP57077 242 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 CUL2Q13617 745 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 GAS6Q14393 721 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 ZNF77Q15935 545 aa8.91□□□□□ -0.98
SPARC-208ENST00000538026 NAIF1Q69YI7 327 aaPredicted RBP8.91□□□□□ -0.98
SPARC-208ENST00000538026 TRIM68Q6AZZ1 485 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms