RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 LPAR3Q9UBY5 353 aa6.45□□□□□ -1.38
CCDC7-208ENST00000537047 TMX2Q9Y320 296 aa6.45□□□□□ -1.38
CCDC7-208ENST00000537047 ZNF267Q14586 743 aaPredicted RBP6.44□□□□□ -1.38
CCDC7-208ENST00000537047 AWAT1Q58HT5 328 aa6.44□□□□□ -1.38
CCDC7-208ENST00000537047 CRELD2Q6UXH1 353 aaPredicted RBP6.44□□□□□ -1.38
CCDC7-208ENST00000537047 KRT73Q86Y46 540 aa6.44□□□□□ -1.38
CCDC7-208ENST00000537047 HPS3Q969F9 1004 aa6.44□□□□□ -1.38
CCDC7-208ENST00000537047 CDK5RAP3Q96JB5 506 aa6.44□□□□□ -1.38
CCDC7-208ENST00000537047 NT5C1BQ96P26 610 aa6.44□□□□□ -1.38
CCDC7-208ENST00000537047 MMS19Q96T76 1030 aa6.44□□□□□ -1.38
CCDC7-208ENST00000537047 MESP1Q9BRJ9 268 aa6.44□□□□□ -1.38
CCDC7-208ENST00000537047 STXBP5LQ9Y2K9 1186 aa6.44□□□□□ -1.38
CCDC7-208ENST00000537047 KCNA3P22001 575 aa6.43□□□□□ -1.38
CCDC7-208ENST00000537047 HOXD9P28356 352 aaPredicted RBP6.43□□□□□ -1.38
CCDC7-208ENST00000537047 DGKEP52429 567 aa6.43□□□□□ -1.38
CCDC7-208ENST00000537047 POLGP54098 1239 aaPredicted RBP6.43□□□□□ -1.38
CCDC7-208ENST00000537047 LAMB3Q13751 1172 aa6.43□□□□□ -1.38
CCDC7-208ENST00000537047 BRDTQ58F21 947 aaPredicted RBP6.43□□□□□ -1.38
CCDC7-208ENST00000537047 RUSC1-AS1Q66K80 236 aa6.43□□□□□ -1.38
CCDC7-208ENST00000537047 BCDIN3DQ7Z5W3 292 aaKnown RBP6.43□□□□□ -1.38
CCDC7-208ENST00000537047 COL23A1Q86Y22 540 aaPredicted RBP6.43□□□□□ -1.38
CCDC7-208ENST00000537047 IZUMO1Q8IYV9 350 aa6.43□□□□□ -1.38
CCDC7-208ENST00000537047 SLC15A4Q8N697 577 aa6.43□□□□□ -1.38
CCDC7-208ENST00000537047 DNAJC5GQ8N7S2 189 aa6.43□□□□□ -1.38
CCDC7-208ENST00000537047 MOGAT1Q96PD6 335 aa6.43□□□□□ -1.38
CCDC7-208ENST00000537047 BRIP1Q9BX63 1249 aa6.43□□□□□ -1.38
CCDC7-208ENST00000537047 MTMR4Q9NYA4 1195 aa6.43□□□□□ -1.38
CCDC7-208ENST00000537047 MED16Q9Y2X0 877 aa6.43□□□□□ -1.38
CCDC7-208ENST00000537047 LRPAP1P30533 357 aa6.42□□□□□ -1.38
CCDC7-208ENST00000537047 KRT17Q04695 432 aa6.42□□□□□ -1.38
CCDC7-208ENST00000537047 GTF2H3Q13889 308 aa6.42□□□□□ -1.38
CCDC7-208ENST00000537047 PTCHD3Q3KNS1 767 aa6.42□□□□□ -1.38
CCDC7-208ENST00000537047 CERKLQ49MI3 558 aaPredicted RBP6.42□□□□□ -1.38
CCDC7-208ENST00000537047 SHC4Q6S5L8 630 aa6.42□□□□□ -1.38
CCDC7-208ENST00000537047 TMEM79Q9BSE2 394 aa6.42□□□□□ -1.38
CCDC7-208ENST00000537047 IP6K2Q9UHH9 426 aa6.42□□□□□ -1.38
CCDC7-208ENST00000537047 FER1L4A9Z1Z3 1794 aa6.41□□□□□ -1.38
CCDC7-208ENST00000537047 TMEM233B4DJY2 109 aa6.41□□□□□ -1.38
CCDC7-208ENST00000537047 USP1O94782 785 aa6.41□□□□□ -1.38
CCDC7-208ENST00000537047 CHRM5P08912 532 aaPredicted RBP6.41□□□□□ -1.38
CCDC7-208ENST00000537047 AKAP5P24588 427 aa6.41□□□□□ -1.38
CCDC7-208ENST00000537047 RAB1AP62820 205 aa6.41□□□□□ -1.38
CCDC7-208ENST00000537047 ZNF268Q14587 947 aaPredicted RBP6.41□□□□□ -1.38
CCDC7-208ENST00000537047 FAM187BQ17R55 369 aa6.41□□□□□ -1.38
CCDC7-208ENST00000537047 TRIM71Q2Q1W2 868 aaKnown RBP6.41□□□□□ -1.38
CCDC7-208ENST00000537047 KLHL22Q53GT1 634 aa6.41□□□□□ -1.38
CCDC7-208ENST00000537047 ZBTB46Q86UZ6 589 aa6.41□□□□□ -1.38
CCDC7-208ENST00000537047 SAMD14Q8IZD0 417 aaPredicted RBP6.41□□□□□ -1.38
CCDC7-208ENST00000537047 MAP3K14Q99558 947 aa6.41□□□□□ -1.38
CCDC7-208ENST00000537047 C17orf80Q9BSJ5 609 aa6.41□□□□□ -1.38
CCDC7-208ENST00000537047 PCDH12Q9NPG4 1184 aa6.41□□□□□ -1.38
CCDC7-208ENST00000537047 ZNF580Q9UK33 172 aa6.41□□□□□ -1.38
CCDC7-208ENST00000537047 COL4A3BPQ9Y5P4 624 aa6.41□□□□□ -1.38
CCDC7-208ENST00000537047 SOCS2O14508 198 aa6.4□□□□□ -1.38
CCDC7-208ENST00000537047 DLDP09622 509 aaKnown RBP6.4□□□□□ -1.38
CCDC7-208ENST00000537047 PF4V1P10720 104 aa6.4□□□□□ -1.38
CCDC7-208ENST00000537047 NPR1P16066 1061 aa6.4□□□□□ -1.38
CCDC7-208ENST00000537047 KRTAP10-6P60371 365 aaPredicted RBP6.4□□□□□ -1.38
CCDC7-208ENST00000537047 CTBP1Q13363 440 aa6.4□□□□□ -1.38
CCDC7-208ENST00000537047 PLA1AQ53H76 456 aa6.4□□□□□ -1.38
CCDC7-208ENST00000537047 ATAT1Q5SQI0 421 aa6.4□□□□□ -1.38
CCDC7-208ENST00000537047 MEX3CQ5U5Q3 659 aaKnown RBP6.4□□□□□ -1.38
CCDC7-208ENST00000537047 RAPGEF4Q8WZA2 1011 aa6.4□□□□□ -1.38
CCDC7-208ENST00000537047 CHMP4CQ96CF2 233 aa6.4□□□□□ -1.38
CCDC7-208ENST00000537047 COQ8BQ96D53 544 aa6.4□□□□□ -1.38
CCDC7-208ENST00000537047 EBF3Q9H4W6 596 aa6.4□□□□□ -1.38
CCDC7-208ENST00000537047 GBA2Q9HCG7 927 aaPredicted RBP6.4□□□□□ -1.38
CCDC7-208ENST00000537047 CADPSQ9ULU8 1353 aa6.4□□□□□ -1.39
CCDC7-208ENST00000537047 UBE2Q2LH0YL09 131 aa6.39□□□□□ -1.39
CCDC7-208ENST00000537047 INSIG1O15503 277 aa6.39□□□□□ -1.39
CCDC7-208ENST00000537047 FGAP02671 866 aa6.39□□□□□ -1.39
CCDC7-208ENST00000537047 FGBP02675 491 aa6.39□□□□□ -1.39
CCDC7-208ENST00000537047 PRF1P14222 555 aa6.39□□□□□ -1.39
CCDC7-208ENST00000537047 CCKBRP32239 447 aa6.39□□□□□ -1.39
CCDC7-208ENST00000537047 PLCD1P51178 756 aa6.39□□□□□ -1.39
CCDC7-208ENST00000537047 PRKAG1P54619 331 aa6.39□□□□□ -1.39
CCDC7-208ENST00000537047 GPR162Q16538 588 aa6.39□□□□□ -1.39
CCDC7-208ENST00000537047 ZNF813Q6ZN06 617 aa6.39□□□□□ -1.39
CCDC7-208ENST00000537047 BPIFB1Q8TDL5 484 aa6.39□□□□□ -1.39
CCDC7-208ENST00000537047 PPP2R3CQ969Q6 453 aa6.39□□□□□ -1.39
CCDC7-208ENST00000537047 MTFMTQ96DP5 389 aaKnown RBP6.39□□□□□ -1.39
CCDC7-208ENST00000537047 FAM118BQ9BPY3 351 aa6.39□□□□□ -1.39
CCDC7-208ENST00000537047 SLC12A5Q9H2X9 1139 aa6.39□□□□□ -1.39
CCDC7-208ENST00000537047 A0A087WWL8 130 aa6.38□□□□□ -1.39
CCDC7-208ENST00000537047 MYO1CO00159 1063 aa6.38□□□□□ -1.39
CCDC7-208ENST00000537047 IGSF3O75054 1194 aa6.38□□□□□ -1.39
CCDC7-208ENST00000537047 PRKCBP05771 671 aa6.38□□□□□ -1.39
CCDC7-208ENST00000537047 SNHG28P0DPA3 235 aa6.38□□□□□ -1.39
CCDC7-208ENST00000537047 CYP19A1P11511 503 aaPredicted RBP6.38□□□□□ -1.39
CCDC7-208ENST00000537047 TKTP29401 623 aaKnown RBP6.38□□□□□ -1.39
CCDC7-208ENST00000537047 RBMS2Q15434 407 aaKnown RBP6.38□□□□□ -1.39
CCDC7-208ENST00000537047 MGAT5BQ3V5L5 792 aa6.38□□□□□ -1.39
CCDC7-208ENST00000537047 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.38□□□□□ -1.39
CCDC7-208ENST00000537047 C16orf52Q8NHV5 167 aa6.38□□□□□ -1.39
CCDC7-208ENST00000537047 PUS7Q96PZ0 661 aaKnown RBP6.38□□□□□ -1.39
CCDC7-208ENST00000537047 HOMER2Q9NSB8 354 aa6.38□□□□□ -1.39
CCDC7-208ENST00000537047 TRMT13Q9NUP7 481 aaKnown RBP6.38□□□□□ -1.39
CCDC7-208ENST00000537047 AMFRQ9UKV5 643 aa6.38□□□□□ -1.39
CCDC7-208ENST00000537047 A0A088AWK7 358 aa6.37□□□□□ -1.39
CCDC7-208ENST00000537047 CES2O00748 559 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms