RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 RGMBQ6NW40 437 aa14.24□□□□□ -0.13
SMG6-203ENST00000536871 DNAJB3Q8WWF6 145 aa14.24□□□□□ -0.13
SMG6-203ENST00000536871 DCAF8L1A6NGE4 600 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 IGF2BP3O00425 579 aaKnown RBP eCLIP14.23□□□□□ -0.13
SMG6-203ENST00000536871 TNPO2O14787 897 aaKnown RBP14.23□□□□□ -0.13
SMG6-203ENST00000536871 ENDOD1O94919 500 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 FAM107AO95990 144 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 SHBGP04278 402 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 PDGFRAP16234 1089 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 TAF6P49848 677 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 BCAT1P54687 386 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 SLC8A3P57103 927 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 SLC6A3Q01959 620 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 GUCY1A3Q02108 690 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 LLGL1Q15334 1064 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 CHADLQ6NUI6 762 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 IFNL1Q8IU54 200 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 SUGP1Q8IWZ8 645 aaKnown RBP14.23□□□□□ -0.13
SMG6-203ENST00000536871 SLC35F5Q8WV83 523 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 HSFY1Q96LI6 401 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 EIF2AQ9BY44 585 aaKnown RBP14.23□□□□□ -0.13
SMG6-203ENST00000536871 ZWILCHQ9H900 591 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 SPC25Q9HBM1 224 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 SLC38A7Q9NVC3 462 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 RRP15Q9Y3B9 282 aaKnown RBP14.23□□□□□ -0.13
SMG6-203ENST00000536871 SMIM28A0A1B0GU29 152 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 TLDC2A0PJX2 215 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 CFAP69A5D8W1 941 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 GMNCA6NCL1 334 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 KPNA7A9QM74 516 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 MCF2LO15068 1137 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 CST8O60676 142 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 ITGBL1O95965 494 aaPredicted RBP14.23□□□□□ -0.13
SMG6-203ENST00000536871 TCF4P15884 667 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 SDC4P31431 198 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 BST2Q10589 180 aaKnown RBP14.23□□□□□ -0.13
SMG6-203ENST00000536871 PRAMEF19Q5SWL8 479 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 C4orf22Q6V702 233 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 CENPUQ71F23 418 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 RPAINQ86UA6 219 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 TOP6BLQ8N6T0 577 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 ANKRD52Q8NB46 1076 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 OR6B3Q8NGW1 331 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 UBA3Q8TBC4 463 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 RSAD2Q8WXG1 361 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 ZMAT2Q96NC0 199 aaKnown RBP14.23□□□□□ -0.13
SMG6-203ENST00000536871 MTG1Q9BT17 334 aaPredicted RBP14.23□□□□□ -0.13
SMG6-203ENST00000536871 SNX25Q9H3E2 840 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 CHST12Q9NRB3 414 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 KLHL11Q9NVR0 708 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 GJD2Q9UKL4 321 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 ACTL7BQ9Y614 415 aa14.23□□□□□ -0.13
SMG6-203ENST00000536871 A0A087WUV0 522 aaPredicted RBP14.22□□□□□ -0.13
SMG6-203ENST00000536871 A8MXQ7 604 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 E5RJQ4 531 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 SGK1O00141 431 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 TRAPPC3O43617 180 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 CDH16O75309 829 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 ZNF189O75820 626 aaPredicted RBP14.22□□□□□ -0.13
SMG6-203ENST00000536871 CPP00450 1065 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 TSHRP16473 764 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 PAX3P23760 479 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 IL1R2P27930 398 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 LRPAP1P30533 357 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 PTPN9P43378 593 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 RPL34P49207 117 aaKnown RBP14.22□□□□□ -0.13
SMG6-203ENST00000536871 PURAQ00577 322 aaKnown RBP14.22□□□□□ -0.13
SMG6-203ENST00000536871 TMEM62Q0P6H9 643 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 AUHQ13825 339 aaKnown RBP14.22□□□□□ -0.13
SMG6-203ENST00000536871 TRIP13Q15645 432 aaPredicted RBP14.22□□□□□ -0.13
SMG6-203ENST00000536871 SWT1Q5T5J6 900 aaKnown RBP14.22□□□□□ -0.13
SMG6-203ENST00000536871 PPP1R26Q5T8A7 1209 aaPredicted RBP14.22□□□□□ -0.13
SMG6-203ENST00000536871 FAM183BPQ6ZVS7 135 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 LIMS2Q7Z4I7 341 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 ANKS1BQ7Z6G8 1248 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 NLRP14Q86W24 1093 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 ARFGAP1Q8N6T3 406 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 APPL2Q8NEU8 664 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 RXFP2Q8WXD0 754 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 MRPL45Q9BRJ2 306 aaKnown RBP14.22□□□□□ -0.13
SMG6-203ENST00000536871 FRMD8Q9BZ67 464 aaPredicted RBP14.22□□□□□ -0.13
SMG6-203ENST00000536871 NXF3Q9H4D5 531 aaKnown RBP14.22□□□□□ -0.13
SMG6-203ENST00000536871 FLRT1Q9NZU1 646 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 LGALS13Q9UHV8 139 aa14.22□□□□□ -0.13
SMG6-203ENST00000536871 KAT6AQ92794 2004 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 MDM4O15151 490 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 TREHO43280 583 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 HUS1O60921 280 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 PFKMP08237 780 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 SLC10A3P09131 477 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 CYP2B6P20813 491 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 TGM2P21980 687 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 GNL1P36915 607 aaPredicted RBP14.21□□□□□ -0.13
SMG6-203ENST00000536871 MAGEA4P43358 317 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 NKX3-2P78367 333 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 OTUD4Q01804 1114 aaKnown RBP14.21□□□□□ -0.13
SMG6-203ENST00000536871 GPS1Q13098 491 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 ORC1Q13415 861 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 RASA2Q15283 850 aa14.21□□□□□ -0.13
SMG6-203ENST00000536871 MFSD14CQ5VZR4 134 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms