RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 NR2F2P24468 414 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 PIK3CAP42336 1068 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 VAMP7P51809 220 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 ORC1Q13415 861 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 ZNF77Q15935 545 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 ZACNQ401N2 412 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 SV2AQ7L0J3 742 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 SPEM1Q8N4L4 309 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 DCLK2Q8N568 766 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 SUMF1Q8NBK3 374 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 ZBTB44Q8NCP5 570 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 TMC2Q8TDI7 906 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 SH3RF2Q8TEC5 729 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 TMEM174Q8WUU8 243 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 C8orf48Q96LL4 319 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 ELOVL4Q9GZR5 314 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 SDCBP2Q9H190 292 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 VRTNQ9H8Y1 702 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 TMEM30AQ9NV96 361 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 DUS2Q9NX74 493 aaKnown RBP15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 GCNT4Q9P109 453 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 WNT6Q9Y6F9 365 aa15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 ZNF638Q14966 1978 aaKnown RBP15.21■□□□□ 0.03
RTN3P1-201ENST00000536295 KIF26AQ9ULI4 1882 aaPredicted RBP15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 RIF1Q5UIP0 2472 aaKnown RBP15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 AKAP3O75969 853 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 TRIM49P0CI25 452 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 TRIM49CP0CI26 452 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 TDGF1P13385 188 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 P4HA1P13674 534 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 IFNAR2P48551 515 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 USP4Q13107 963 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 CCINQ13939 588 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 PDGFRLQ15198 375 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 SGSM1Q2NKQ1 1148 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 C1orf220Q5T0J3 134 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 SPOPLQ6IQ16 392 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 ACOT1Q86TX2 421 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 SMYD4Q8IYR2 804 aaPredicted RBP15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 KIAA2013Q8IYS2 634 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 RUBCNQ92622 972 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 NELL1Q92832 810 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 CEP295NLQ96MC4 621 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 MMRN2Q9H8L6 949 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 EHD2Q9NZN4 543 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 FANCMQ8IYD8 2048 aa15.2■□□□□ 0.02
RTN3P1-201ENST00000536295 ATP8B3O60423 1300 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 PTPRDP23468 1912 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 FAM186AA6NE01 2351 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 GOLGA6L4A6NEF3 574 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 IKBKBO14920 756 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 LILRB5O75023 590 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 HLA-DRAP01903 254 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 KRT13P13646 458 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 GCLMP48507 274 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 NRLP54845 237 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 NOP14P78316 857 aaKnown RBP15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 DMWDQ09019 674 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 GRSF1Q12849 480 aaKnown RBP eCLIP15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 TAF10Q12962 218 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 PNOCQ13519 176 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 NAIF1Q69YI7 327 aaPredicted RBP15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 MAMSTRQ6ZN01 415 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 FAM35AQ86V20 835 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 FAM186BQ8IYM0 893 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 GUF1Q8N442 669 aaKnown RBP15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 CPA6Q8N4T0 437 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 OSCP1Q8WVF1 389 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 CHFRQ96EP1 664 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 CCDC34Q96HJ3 373 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 TNIP3Q96KP6 325 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 KCNK16Q96T55 309 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 TTLL2Q9BWV7 592 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 FAM126AQ9BYI3 521 aaPredicted RBP15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 ECT2Q9H8V3 914 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 C2orf42Q9NWW7 574 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 NCDNQ9UBB6 729 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 HMGXB4Q9UGU5 601 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 ARHGAP26Q9UNA1 814 aa15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 SMG5Q9UPR3 1016 aaKnown RBP15.19■□□□□ 0.02
RTN3P1-201ENST00000536295 GREB1Q4ZG55 1949 aa15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 ZNF840PA6NDX5 716 aa15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 CHURC1-FNTBB4DL54 471 aa15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 CCDC130P13994 396 aa15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 RPL13P26373 211 aaKnown RBP15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 HOXC13P31276 330 aa15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 GJA4P35212 333 aa15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 FNTBP49356 437 aa15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 PDE6CP51160 858 aa15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 NDST1P52848 882 aa15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 AMPD2Q01433 879 aa15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 ADAM9Q13443 819 aa15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 LPAL2Q16609 132 aa15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 TMEM196Q5HYL7 178 aa15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 HEATR6Q6AI08 1181 aaKnown RBP15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 FSTL4Q6MZW2 842 aa15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 INTS8Q75QN2 995 aaKnown RBP15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 NUP93Q8N1F7 819 aa15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 TAF4BQ92750 862 aa15.18■□□□□ 0.02
RTN3P1-201ENST00000536295 ATP2A3Q93084 1043 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms