RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 TAF6P49848 677 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 AFF1P51825 1210 aaKnown RBP8.42□□□□□ -1.06
COL21A1-212ENST00000535941 ZNF143P52747 638 aaPredicted RBP8.42□□□□□ -1.06
COL21A1-212ENST00000535941 MESDQ14696 234 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 FBXW10Q5XX13 1052 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 LRRC31Q6UY01 552 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 RSPH3Q86UC2 560 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 TMEM86AQ8N2M4 240 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 ANKRD52Q8NB46 1076 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 UROC1Q96N76 676 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 SPC25Q9HBM1 224 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 USP3Q9Y6I4 520 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 ZSCAN5CA6NGD5 496 aaPredicted RBP8.42□□□□□ -1.06
COL21A1-212ENST00000535941 TLR3O15455 904 aaKnown RBP8.42□□□□□ -1.06
COL21A1-212ENST00000535941 XPOTO43592 962 aaKnown RBP8.42□□□□□ -1.06
COL21A1-212ENST00000535941 FKTNO75072 461 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 RPS6KA5O75582 802 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 IL1R2P27930 398 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 PTPN9P43378 593 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 ADCY1Q08828 1119 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 PTK6Q13882 451 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 CASP8Q14790 479 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 OASLQ15646 514 aaKnown RBP8.42□□□□□ -1.06
COL21A1-212ENST00000535941 TCTN1Q2MV58 587 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 C8orf74Q6P047 294 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 PMF1Q6P1K2 205 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 FAM183BPQ6ZVS7 135 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 RNF180Q86T96 592 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 ECHDC2Q86YB7 292 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 IQCKQ8N0W5 287 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 CAGE1Q8TC20 777 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 PIWIL1Q96J94 861 aaKnown RBP8.42□□□□□ -1.06
COL21A1-212ENST00000535941 PEBP4Q96S96 227 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 KRT12Q99456 494 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 DCLK3Q9C098 648 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 TRMT13Q9NUP7 481 aaKnown RBP8.42□□□□□ -1.06
COL21A1-212ENST00000535941 hCG_1818297A0A087WSY0 165 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 ARVCFO00192 962 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 XPO1O14980 1071 aaKnown RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 CEP104O60308 925 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 EOMESO95936 686 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 SKIP12755 728 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 GRIK3Q13003 919 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 TRADDQ15628 312 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 TXNRD3NBQ6F5E7 133 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 SYDE1Q6ZW31 735 aaPredicted RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 ANKRD33Q7Z3H0 272 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 TEKT4Q8WW24 435 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 SLC2A13Q96QE2 648 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 DDX56Q9NY93 547 aaKnown RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 NXF1Q9UBU9 619 aaKnown RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 TTC36A6NLP5 189 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 EBAG9O00559 213 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 PITPNM1O00562 1244 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 B4GALT3O60512 393 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 PPFIA2O75334 1257 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 HEXIM1O94992 359 aaKnown RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 GJB6O95452 261 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 LMO2P25791 158 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 RFC1P35251 1148 aaPredicted RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 COILP38432 576 aaPredicted RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 UAP1Q16222 522 aaPredicted RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 C2CD6Q53TS8 623 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 SLC26A9Q7LBE3 791 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 ERICH1Q86X53 443 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 RNF168Q8IYW5 571 aaPredicted RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 RCOR2Q8IZ40 523 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 ART4Q93070 314 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 MCEEQ96PE7 176 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 FRMD8P1Q9BZ68 369 aaPredicted RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 CRTAC1Q9NQ79 661 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 SEPT11Q9NVA2 429 aaKnown RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 KIF26AQ9ULI4 1882 aaPredicted RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 TET1Q8NFU7 2136 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 KRIT1O00522 736 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 PAPSS1O43252 624 aaPredicted RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 HCRTO43612 131 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 CARSP49589 748 aaKnown RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 ADCY2Q08462 1091 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 BST2Q10589 180 aaKnown RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 CCNG2Q16589 344 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 GOLGA7BQ2TAP0 167 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 CCDC14Q49A88 953 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 PLEKHG4Q58EX7 1191 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 TNFAIP8L3Q5GJ75 292 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 NAIF1Q69YI7 327 aaPredicted RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 BEND5Q7L4P6 421 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 FUKQ8N0W3 1084 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 C12orf29Q8N999 325 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 TSEN2Q8NCE0 465 aaKnown RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 RSPH1Q8WYR4 309 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 N4BP2L2Q92802 583 aaPredicted RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 C18orf8Q96DM3 657 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 PGAP3Q96FM1 320 aaPredicted RBP8.41□□□□□ -1.06
COL21A1-212ENST00000535941 HSFY1Q96LI6 401 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 FAM204AQ9H8W3 233 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 GOLGA2P5Q9HBQ8 144 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 PTPN22Q9Y2R2 807 aa8.41□□□□□ -1.06
COL21A1-212ENST00000535941 MTCL1Q9Y4B5 1905 aaKnown RBP8.4□□□□□ -1.06
COL21A1-212ENST00000535941 F8VP50 259 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms