RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 MBLAC1A4D2B0 266 aaPredicted RBP14.03□□□□□ -0.16
VPS33B-202ENST00000535906 RNF8O76064 485 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 CYP2C9P11712 490 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 ATP5DP30049 168 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 OTUD4Q01804 1114 aaKnown RBP14.03□□□□□ -0.16
VPS33B-202ENST00000535906 TAZQ16635 292 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 MORN1Q5T089 497 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 ICE2Q659A1 982 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 RELL1Q8IUW5 271 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 CCHCR1Q8TD31 782 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 CCT6BQ92526 530 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 KDM4CQ9H3R0 1056 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 NXF3Q9H4D5 531 aaKnown RBP14.03□□□□□ -0.16
VPS33B-202ENST00000535906 GJD2Q9UKL4 321 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 KIAA1257Q9ULG3 409 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 FOXO6A8MYZ6 492 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 SGK1O00141 431 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 TCEA3O75764 348 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 GRAP2O75791 330 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 TRUB2O95900 331 aaKnown RBP14.03□□□□□ -0.16
VPS33B-202ENST00000535906 IFNB1P01574 187 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 DARSP14868 501 aaKnown RBP14.03□□□□□ -0.16
VPS33B-202ENST00000535906 OR6B2Q6IFH4 312 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 NOTUMQ6P988 496 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 FAM183BPQ6ZVS7 135 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 BBS12Q6ZW61 710 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 ACOT1Q86TX2 421 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 TLK2Q86UE8 772 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 LRRC34Q8IZ02 419 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 ANKS4BQ8N8V4 417 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 KCTD6Q8NC69 237 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 CMASQ8NFW8 434 aaPredicted RBP14.03□□□□□ -0.16
VPS33B-202ENST00000535906 TMEM40Q8WWA1 233 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 DNAJB3Q8WWF6 145 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 HSPH1Q92598 858 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 PEBP4Q96S96 227 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 SLC5A4Q9NY91 659 aa14.03□□□□□ -0.16
VPS33B-202ENST00000535906 TPX2Q9ULW0 747 aaKnown RBP14.03□□□□□ -0.16
VPS33B-202ENST00000535906 TRIP12Q14669 1992 aaPredicted RBP14.03□□□□□ -0.16
VPS33B-202ENST00000535906 SMIM35A0A1B0GVV1 85 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 DNM1LO00429 736 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 GHRP10912 638 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 PECAM1P16284 738 aaPredicted RBP14.02□□□□□ -0.16
VPS33B-202ENST00000535906 AKAP5P24588 427 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 MAGEA4P43358 317 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 RGS7P49802 495 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 ZNF143P52747 638 aaPredicted RBP14.02□□□□□ -0.16
VPS33B-202ENST00000535906 GDF10P55107 478 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 ITIH4Q14624 930 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 ACAP1Q15027 740 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 SPRED3Q2MJR0 410 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 C15orf59Q2T9L4 293 aaPredicted RBP14.02□□□□□ -0.16
VPS33B-202ENST00000535906 GOLGA7BQ2TAP0 167 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 PMF1Q6P1K2 205 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 ALKAL1Q6UXT8 129 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 TTC39CQ8N584 583 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 ARHGEF2Q92974 986 aaKnown RBP14.02□□□□□ -0.16
VPS33B-202ENST00000535906 FAM124BQ9H5Z6 455 aaPredicted RBP14.02□□□□□ -0.16
VPS33B-202ENST00000535906 FAM49BQ9NUQ9 324 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 ASNSD1Q9NWL6 643 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 DERAQ9Y315 318 aa14.02□□□□□ -0.16
VPS33B-202ENST00000535906 RALGAPA2Q2PPJ7 1873 aa14.02□□□□□ -0.17
VPS33B-202ENST00000535906 C2CD4BA6NLJ0 364 aa14.02□□□□□ -0.17
VPS33B-202ENST00000535906 RECQL4O94761 1208 aa14.02□□□□□ -0.17
VPS33B-202ENST00000535906 ZNF865P0CJ78 1059 aaPredicted RBP14.02□□□□□ -0.17
VPS33B-202ENST00000535906 CREB1P16220 341 aa14.02□□□□□ -0.17
VPS33B-202ENST00000535906 PDGFRAP16234 1089 aa14.02□□□□□ -0.17
VPS33B-202ENST00000535906 YARSP54577 528 aaKnown RBP14.02□□□□□ -0.17
VPS33B-202ENST00000535906 ADAM17P78536 824 aa14.02□□□□□ -0.17
VPS33B-202ENST00000535906 ZNF200P98182 395 aaPredicted RBP14.02□□□□□ -0.17
VPS33B-202ENST00000535906 PDE4CQ08493 712 aa14.02□□□□□ -0.17
VPS33B-202ENST00000535906 MAP2K5Q13163 448 aa14.02□□□□□ -0.17
VPS33B-202ENST00000535906 MFSD10Q14728 455 aa14.02□□□□□ -0.17
VPS33B-202ENST00000535906 CCL14Q16627 93 aa14.02□□□□□ -0.17
VPS33B-202ENST00000535906 PKDCCQ504Y2 493 aa14.02□□□□□ -0.17
VPS33B-202ENST00000535906 CST9Q5W186 159 aa14.02□□□□□ -0.17
VPS33B-202ENST00000535906 CYP4V2Q6ZWL3 525 aaPredicted RBP14.02□□□□□ -0.17
VPS33B-202ENST00000535906 TTC30AQ86WT1 665 aa14.02□□□□□ -0.17
VPS33B-202ENST00000535906 RXFP2Q8WXD0 754 aa14.02□□□□□ -0.17
VPS33B-202ENST00000535906 LPIN3Q9BQK8 851 aa14.02□□□□□ -0.17
VPS33B-202ENST00000535906 APOL6Q9BWW8 343 aa14.02□□□□□ -0.17
VPS33B-202ENST00000535906 ZNF236Q9UL36 1845 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 TREHO43280 583 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 GPD1P21695 349 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 CDC42EP1Q00587 391 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 RNASEH2BQ5TBB1 312 aaKnown RBP14.01□□□□□ -0.17
VPS33B-202ENST00000535906 CYP4F22Q6NT55 531 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 CALN1Q9BXU9 219 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 TRIM6Q9C030 488 aaPredicted RBP14.01□□□□□ -0.17
VPS33B-202ENST00000535906 NSRP1Q9H0G5 558 aaKnown RBP14.01□□□□□ -0.17
VPS33B-202ENST00000535906 RRAGCQ9HB90 399 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 PCDH9Q9HC56 1237 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 SAYSD1Q9NPB0 183 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 IGF2BP3O00425 579 aaKnown RBP eCLIP14.01□□□□□ -0.17
VPS33B-202ENST00000535906 HCRTO43612 131 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 RASSF9O75901 435 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 PCK1P35558 622 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 SCTRP47872 440 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 MMRN1Q13201 1228 aa14.01□□□□□ -0.17
VPS33B-202ENST00000535906 FASTKD3Q14CZ7 662 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms