RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 AVENQ9NQS1 362 aaPredicted RBP12.78□□□□□ -0.36
CHD4-203ENST00000535717 ASAH2Q9NR71 780 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 TSPAN16Q9UKR8 245 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 DENND4AQ7Z401 1863 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 BDP1A6H8Y1 2624 aa12.77□□□□□ -0.36
CHD4-203ENST00000535717 VCANP13611 3396 aa12.77□□□□□ -0.36
CHD4-203ENST00000535717 F8VZ95 297 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 TNFRSF10BO14763 440 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 CSH1P0DML2 217 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 CSH2P0DML3 217 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 MYL4P12829 197 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 NPR3P17342 541 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 CLCN1P35523 988 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 PBX1P40424 430 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 JAM2P57087 298 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 USP46P62068 366 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 CNGA2Q16280 664 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 TAF12Q16514 161 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 PRSS36Q5K4E3 855 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 CYP4A22Q5TCH4 519 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 LCLAT1Q6UWP7 414 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 TTC30AQ86WT1 665 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 ANKRD52Q8NB46 1076 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 XPO4Q9C0E2 1151 aaKnown RBP12.77□□□□□ -0.37
CHD4-203ENST00000535717 MAGED2Q9UNF1 606 aaPredicted RBP12.77□□□□□ -0.37
CHD4-203ENST00000535717 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.77□□□□□ -0.37
CHD4-203ENST00000535717 MRPS23Q9Y3D9 190 aaKnown RBP12.77□□□□□ -0.37
CHD4-203ENST00000535717 DAAM1Q9Y4D1 1078 aa12.77□□□□□ -0.37
CHD4-203ENST00000535717 GREB1Q4ZG55 1949 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 TCF20Q9UGU0 1960 aaKnown RBP12.76□□□□□ -0.37
CHD4-203ENST00000535717 HHLA1C9JL84 531 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 ZNF197O14709 1029 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 MOSPD3O75425 235 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 MICAL2O94851 1124 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 CEBPBP17676 345 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 SP100P23497 879 aaPredicted RBP12.76□□□□□ -0.37
CHD4-203ENST00000535717 GNA15P30679 374 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 SSTR3P32745 418 aaPredicted RBP12.76□□□□□ -0.37
CHD4-203ENST00000535717 PKDCCQ504Y2 493 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 TJAP1Q5JTD0 557 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 DENND5BQ6ZUT9 1274 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 GAREM2Q75VX8 874 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 PDZD4Q76G19 769 aaPredicted RBP12.76□□□□□ -0.37
CHD4-203ENST00000535717 GET4Q7L5D6 327 aaPredicted RBP12.76□□□□□ -0.37
CHD4-203ENST00000535717 SLC47A2Q86VL8 602 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 LEMD2Q8NC56 503 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 SHKBP1Q8TBC3 707 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 UBA3Q8TBC4 463 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 ZNF606Q8WXB4 792 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 ING5Q8WYH8 240 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 TRMT2BQ96GJ1 504 aaKnown RBP12.76□□□□□ -0.37
CHD4-203ENST00000535717 RPGRIP1Q96KN7 1286 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 MYRFLQ96LU7 910 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 MYADMQ96S97 322 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 TTLL2Q9BWV7 592 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 IL21Q9HBE4 155 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 PRKAG3Q9UGI9 489 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 MYH10P35580 1976 aa12.76□□□□□ -0.37
CHD4-203ENST00000535717 A0A1W2PRU2 124 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 TULP2O00295 520 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 AP5Z1O43299 807 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 THAP12O43422 761 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 FGF19O95750 216 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 F11P03951 625 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 CFHP08603 1231 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 GJA1P17302 382 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 GABRR2P28476 465 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 SOX5P35711 763 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 SLC5A3P53794 718 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 BCAT1P54687 386 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 PTK2Q05397 1052 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 ZP2Q05996 745 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 PDE4CQ08493 712 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 STILQ15468 1287 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 POTEHQ6S545 545 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 OTOP3Q7RTS5 596 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 GPRIN1Q7Z2K8 1008 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 TMEM150AQ86TG1 271 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 ADHFE1Q8IWW8 467 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 NUP93Q8N1F7 819 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 SCAMP5Q8TAC9 235 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 FGF13Q92913 245 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 SPAG5Q96R06 1193 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 UBXN6Q9BZV1 441 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 PNPLA8Q9NP80 782 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.75□□□□□ -0.374e-10■■□□□ 11.5
CHD4-203ENST00000535717 IL37Q9NZH6 218 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 HESX1Q9UBX0 185 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 USTQ9Y2C2 406 aa12.75□□□□□ -0.37
CHD4-203ENST00000535717 TTC28Q96AY4 2481 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 PATJQ8NI35 1801 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 C2CD4DB7Z1M9 353 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 LOC730098B7Z3J9 87 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 M0QYV0 167 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 XPO1O14980 1071 aaKnown RBP12.74□□□□□ -0.37
CHD4-203ENST00000535717 CBFA2T2O43439 604 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 MED7O43513 233 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 TADA3O75528 432 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 GFPT2O94808 682 aa12.74□□□□□ -0.37
CHD4-203ENST00000535717 RTN3O95197 1032 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms