RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 CAPN9O14815 690 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 PLSCR1O15162 318 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 NVLO15381 856 aaKnown RBP10.73□□□□□ -0.69
DDB1-204ENST00000535147 LSM8O95777 96 aaKnown RBP10.73□□□□□ -0.69
DDB1-204ENST00000535147 SUPT20HL2P0C7V6 817 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 RBP3P10745 1247 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 MYL2P10916 166 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 ETV4P43268 484 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 NAMPTP43490 491 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 RAP1GAPP47736 663 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 EIF3EP60228 445 aaKnown RBP10.73□□□□□ -0.69
DDB1-204ENST00000535147 YWHAGP61981 247 aaKnown RBP eCLIP10.73□□□□□ -0.69
DDB1-204ENST00000535147 TFAMQ00059 246 aaKnown RBP10.73□□□□□ -0.69
DDB1-204ENST00000535147 MAP3K10Q02779 954 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 MMRN1Q13201 1228 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 CAPSQ13938 189 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 TSNAXIP1Q2TAA8 658 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 SUPT20HL1Q3ZLR7 823 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 FKBP1CQ5VVH2 108 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 PRPF39Q86UA1 669 aaKnown RBP10.73□□□□□ -0.69
DDB1-204ENST00000535147 ALYREFQ86V81 257 aaKnown RBP10.73□□□□□ -0.69
DDB1-204ENST00000535147 VPS52Q8N1B4 723 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 TEX9Q8N6V9 391 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 SLC7A3Q8WY07 619 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 SKA1Q96BD8 255 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 ZNF333Q96JL9 665 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 CYTH2Q99418 400 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 MECRQ9BV79 373 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 DHX33Q9H6R0 707 aaKnown RBP10.73□□□□□ -0.69
DDB1-204ENST00000535147 ZNF395Q9H8N7 513 aaPredicted RBP10.73□□□□□ -0.69
DDB1-204ENST00000535147 NXF1Q9UBU9 619 aaKnown RBP10.73□□□□□ -0.69
DDB1-204ENST00000535147 FZD1Q9UP38 647 aa10.73□□□□□ -0.69
DDB1-204ENST00000535147 PPP1R12AO14974 1030 aaPredicted RBP10.72□□□□□ -0.69
DDB1-204ENST00000535147 MAFGO15525 162 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 TBX10O75333 385 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 PIGRP01833 764 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 OSTNP61366 133 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 CDK16Q00536 496 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 DPYSL3Q14195 570 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 PRKD1Q15139 912 aaPredicted RBP10.72□□□□□ -0.69
DDB1-204ENST00000535147 RAB6CQ53S08 254 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 MDH1BQ5I0G3 518 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 SPDYAQ5MJ70 313 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 THEMIS2Q5TEJ8 643 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 PPP1R2P3Q6NXS1 205 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 TMEM154Q6P9G4 183 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 CDR2LQ86X02 465 aaPredicted RBP10.72□□□□□ -0.69
DDB1-204ENST00000535147 NIPA2Q8N8Q9 360 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 KCTD6Q8NC69 237 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 FBXO27Q8NI29 283 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 SPATA18Q8TC71 538 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 LRRN4Q8WUT4 740 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 ZNF668Q96K58 619 aaPredicted RBP10.72□□□□□ -0.69
DDB1-204ENST00000535147 CPXM1Q96SM3 734 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 NMUR2Q9GZQ4 415 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 NIF3L1Q9GZT8 377 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 RAB6CQ9H0N0 254 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 ZNF302Q9NR11 478 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 STOML1Q9UBI4 398 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 FETUBQ9UGM5 382 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 IKBKGQ9Y6K9 419 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 RGPD3A6NKT7 1758 aaPredicted RBP10.72□□□□□ -0.69
DDB1-204ENST00000535147 RGPD4Q7Z3J3 1758 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 FCHO1O14526 889 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 MAP3K6O95382 1288 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 OATP04181 439 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 INHBAP08476 426 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 DHRS4L1P0CG22 281 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 ESRRAP11474 423 aaPredicted RBP10.72□□□□□ -0.69
DDB1-204ENST00000535147 ARL2P36404 184 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 PSMC1P62191 440 aaKnown RBP10.72□□□□□ -0.69
DDB1-204ENST00000535147 KLC1Q07866 573 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 GNPTABQ3T906 1256 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 POLNQ7Z5Q5 900 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 BRSK2Q8IWQ3 736 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 CTAGE3PQ8IX95 158 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 DLGAP2Q9P1A6 1054 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 POLIQ9UNA4 740 aa10.72□□□□□ -0.69
DDB1-204ENST00000535147 SIGLEC16A6NMB1 481 aa10.71□□□□□ -0.69
DDB1-204ENST00000535147 KRT7P08729 469 aa10.71□□□□□ -0.69
DDB1-204ENST00000535147 ACADSP16219 412 aa10.71□□□□□ -0.69
DDB1-204ENST00000535147 EIF4BP23588 611 aaKnown RBP10.71□□□□□ -0.69
DDB1-204ENST00000535147 VHLP40337 213 aa10.71□□□□□ -0.69
DDB1-204ENST00000535147 NEK3P51956 506 aa10.71□□□□□ -0.69
DDB1-204ENST00000535147 CDH8P55286 799 aa10.71□□□□□ -0.69
DDB1-204ENST00000535147 MXRA7P84157 204 aa10.71□□□□□ -0.69
DDB1-204ENST00000535147 ZNF200P98182 395 aaPredicted RBP10.71□□□□□ -0.69
DDB1-204ENST00000535147 TRPC3Q13507 836 aa10.71□□□□□ -0.69
DDB1-204ENST00000535147 ZC3H12AQ5D1E8 599 aaKnown RBP10.71□□□□□ -0.69
DDB1-204ENST00000535147 SH3PXD2AQ5TCZ1 1133 aa10.71□□□□□ -0.69
DDB1-204ENST00000535147 FAXCQ5TGI0 409 aa10.71□□□□□ -0.69
DDB1-204ENST00000535147 XRRA1Q6P2D8 792 aa10.71□□□□□ -0.69
DDB1-204ENST00000535147 SPDYE1Q8NFV5 336 aaPredicted RBP10.71□□□□□ -0.69
DDB1-204ENST00000535147 SCG3Q8WXD2 468 aaKnown RBP10.71□□□□□ -0.69
DDB1-204ENST00000535147 ALKBH8Q96BT7 664 aaKnown RBP10.71□□□□□ -0.69
DDB1-204ENST00000535147 ZBTB10Q96DT7 871 aa10.71□□□□□ -0.69
DDB1-204ENST00000535147 CFAP36Q96G28 342 aa10.71□□□□□ -0.69
DDB1-204ENST00000535147 APOPT1Q96IL0 206 aa10.71□□□□□ -0.69
DDB1-204ENST00000535147 TEPSINQ96N21 525 aa10.71□□□□□ -0.69
DDB1-204ENST00000535147 SYNCQ9H7C4 482 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms