RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 RPL34P49207 117 aaKnown RBP21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 RABGGTBP53611 331 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 MAP3K7CLP57077 242 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 WDR5P61964 334 aaKnown RBP21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 ZNF211Q13398 564 aaPredicted RBP21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CFAP221Q4G0U5 840 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 RSRC2Q7L4I2 434 aaKnown RBP21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 UBL4BQ8N7F7 174 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CLEC4CQ8WTT0 213 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 BCL7CQ8WUZ0 217 aaPredicted RBP21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 B3GALT6Q96L58 329 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 TMEM175Q9BSA9 504 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 COLEC11Q9BWP8 271 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 PCDHA3Q9Y5H8 950 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 NLRC5Q86WI3 1866 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CCDC66A2RUB6 948 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 GRAP2O75791 330 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 AP1G2O75843 785 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 LCP1P13796 627 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 RBM10P98175 930 aaKnown RBP21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 TAF5Q15542 800 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 TEX35Q5T0J7 233 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 FAM171A1Q5VUB5 890 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 AADACL2Q6P093 401 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CEP57Q86XR8 500 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 NOA1Q8NC60 698 aaKnown RBP21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CARD9Q9H257 536 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 PTPRDP23468 1912 aa21.39■■□□□ 1.02
TNFRSF1A-205ENST00000534885 OAZ2O95190 189 aa21.39■■□□□ 1.01
TNFRSF1A-205ENST00000534885 TCF4P15884 667 aa21.39■■□□□ 1.01
TNFRSF1A-205ENST00000534885 MAN1A1P33908 653 aa21.39■■□□□ 1.01
TNFRSF1A-205ENST00000534885 PAFAH1B1P43034 410 aa21.39■■□□□ 1.01
TNFRSF1A-205ENST00000534885 SLC8A3P57103 927 aa21.39■■□□□ 1.01
TNFRSF1A-205ENST00000534885 TAS2R40P59535 323 aa21.39■■□□□ 1.01
TNFRSF1A-205ENST00000534885 TRNP1Q6NT89 227 aa21.39■■□□□ 1.01
TNFRSF1A-205ENST00000534885 FUT10Q6P4F1 479 aa21.39■■□□□ 1.01
TNFRSF1A-205ENST00000534885 OTOP2Q7RTS6 562 aa21.39■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ZNF572Q7Z3I7 529 aaPredicted RBP21.39■■□□□ 1.01
TNFRSF1A-205ENST00000534885 HSFY1Q96LI6 401 aa21.39■■□□□ 1.01
TNFRSF1A-205ENST00000534885 KCNK16Q96T55 309 aa21.39■■□□□ 1.01
TNFRSF1A-205ENST00000534885 SMOQ99835 787 aa21.39■■□□□ 1.01
TNFRSF1A-205ENST00000534885 RNF14Q9UBS8 474 aa21.39■■□□□ 1.01
TNFRSF1A-205ENST00000534885 PTPRSQ13332 1948 aa21.39■■□□□ 1.01
TNFRSF1A-205ENST00000534885 SYN3O14994 580 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 AMHP03971 560 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 OR4Q2P0C623 313 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 TSPY1Q01534 308 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 C2orf54Q08AI8 447 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 VARS2Q5ST30 1063 aaKnown RBP21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 SPATA4Q8NEY3 305 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ZMIZ2Q8NF64 920 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 GOLGA1Q92805 767 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 CWH43Q9H720 699 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 CYLDQ9NQC7 956 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 TMEM59LQ9UK28 342 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 SF3B1O75533 1304 aaKnown RBP eCLIP21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 PSMA2P25787 234 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 FLT3P36888 993 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 SLC6A3Q01959 620 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ADIGQ0VDE8 80 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 PIGHQ14442 188 aaPredicted RBP21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ELF2Q15723 593 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 C16orf59Q7L2K0 433 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 RASGEF1CQ8N431 466 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 NIPA2Q8N8Q9 360 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 FNIP1Q8TF40 1166 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 UBXN4Q92575 508 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 KHSRPQ92945 711 aaKnown RBP eCLIP21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ZNF689Q96CS4 500 aaPredicted RBP21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 RNPC3Q96LT9 517 aaKnown RBP21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 IL23AQ9NPF7 189 aa21.38■■□□□ 1.01
TNFRSF1A-205ENST00000534885 BDNFP23560 247 aa21.37■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ACADSBP45954 432 aa21.37■■□□□ 1.01
TNFRSF1A-205ENST00000534885 SNX16P57768 344 aa21.37■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ACTRT1Q8TDG2 376 aa21.37■■□□□ 1.01
TNFRSF1A-205ENST00000534885 SMARCD1Q96GM5 515 aa21.37■■□□□ 1.01
TNFRSF1A-205ENST00000534885 PYGMP11217 842 aa21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 SSR1P43307 286 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ALDH7A1P49419 539 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 CC2D1AQ6P1N0 951 aaPredicted RBP21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ZDHHC17Q8IUH5 632 aa21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 EPC1Q9H2F5 836 aa21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 RC3H2Q9HBD1 1191 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 C2CD4BA6NLJ0 364 aa21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 PGRMC1O00264 195 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 EFCAB14O75071 495 aa21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 FGFR3P22607 806 aa21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 GJC1P36383 396 aa21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 NDUFV1P49821 464 aa21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 RWDD2BP57060 319 aa21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 TAS1R1Q7RTX1 841 aa21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 GPRIN1Q7Z2K8 1008 aa21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ARFGAP1Q8N6T3 406 aa21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 KCTD13Q8WZ19 329 aa21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 BADQ92934 168 aa21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 RPGRIP1Q96KN7 1286 aa21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.36■■□□□ 1.013e-6■■■□□ 18.5
TNFRSF1A-205ENST00000534885 RBM12Q9NTZ6 932 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 PRKAG2Q9UGJ0 569 aa21.36■■□□□ 1.01
TNFRSF1A-205ENST00000534885 LCMT1Q9UIC8 334 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms