RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 HAPLN1P10915 354 aaPredicted RBP9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 CYP2F1P24903 491 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 LMO2P25791 158 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 GABRR2P28476 465 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 VIPR2P41587 438 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 LHX1P48742 406 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 MYL6P60660 151 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 CYP4F8P98187 520 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 CYP27A1Q02318 531 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 DDR2Q16832 855 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 SOWAHAQ2M3V2 549 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 WDR72Q3MJ13 1102 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 STXBP5Q5T5C0 1151 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 ISM2Q6H9L7 571 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 C16orf46Q6P387 395 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 SCARA5Q6ZMJ2 495 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 ITIH5Q86UX2 942 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 SPATA2LQ8IUW3 424 aaPredicted RBP9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 TMEM86AQ8N2M4 240 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 TOP6BLQ8N6T0 577 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 TMEM105Q8N8V8 129 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 OR6B3Q8NGW1 331 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 CXorf38Q8TB03 319 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 SHKBP1Q8TBC3 707 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 ZSCAN18Q8TBC5 510 aaPredicted RBP9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 PLEKHO2Q8TD55 490 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 EEF2KMTQ96G04 330 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 GCNAQ96QF7 691 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 MRPL45Q9BRJ2 306 aaKnown RBP9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 DNAJC25Q9H1X3 360 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 KCTD10Q9H3F6 313 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 ZFP14Q9HCL3 533 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 ZNF334Q9HCZ1 680 aaPredicted RBP9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 GDAP2Q9NXN4 497 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 GDE1Q9NZC3 331 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 ZNF232Q9UNY5 417 aa9.56□□□□□ -0.88
CCDC90B-219ENST00000534753 MYBPHLA2RUH7 354 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 KRBA1A5PL33 1030 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 LRRIQ3A6PVS8 624 aaPredicted RBP9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 MOSPD3O75425 235 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 RHOBTB3O94955 611 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 ATF6P18850 670 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 CD72P21854 359 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 NR2F2P24468 414 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 PCSK1P29120 753 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 GNL1P36915 607 aaPredicted RBP9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 PLA2G5P39877 138 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 RAP1GAPP47736 663 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 DLG4P78352 724 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 PRR20EP86478 221 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 PRR20CP86479 221 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 PRR20DP86480 221 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 PRR20BP86481 221 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 PRR20AP86496 221 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 NFE2Q16621 373 aaPredicted RBP9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 ARHGAP15Q53QZ3 475 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 GPR158Q5T848 1215 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 C12orf56Q8IXR9 622 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 YAF2Q8IY57 180 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 FMR1NBQ8N0W7 255 aaPredicted RBP9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 LEMD2Q8NC56 503 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 PRSS33Q8NF86 280 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 SPPL2BQ8TCT7 592 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 C2orf15Q8WU43 125 aaKnown RBP9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 SMARCD2Q92925 531 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 PSMG2Q969U7 264 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 SYT15Q9BQS2 421 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 ACBD6Q9BR61 282 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 BRD9Q9H8M2 597 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 TBC1D17Q9HA65 648 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 ARHGEF3Q9NR81 526 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 FAM86C1Q9NVL1 165 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 WNT16Q9UBV4 365 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 ASB3Q9Y575 518 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 NOTCH4Q99466 2003 aa9.55□□□□□ -0.88
CCDC90B-219ENST00000534753 A8MXQ7 604 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 H0Y858 1186 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 GADD45BO75293 160 aaPredicted RBP9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 ECI2O75521 394 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 SMC2O95347 1197 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 DCNP07585 359 aaKnown RBP9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 TRIM49P0CI25 452 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 TRIM49CP0CI26 452 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 KRT13P13646 458 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 NPR3P17342 541 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 BDNFP23560 247 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 MAPK1P28482 360 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 GDI1P31150 447 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 NOS2P35228 1153 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 GRIK1P39086 918 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 PIK3CAP42336 1068 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 CDH8P55286 799 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 FAM160A1Q05DH4 1040 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 SMARCB1Q12824 385 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 IFRD2Q12894 506 aaPredicted RBP9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 ADAM9Q13443 819 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 UBXN2BQ14CS0 331 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 ZNF699Q32M78 642 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 SLC44A4Q53GD3 710 aa9.54□□□□□ -0.88
CCDC90B-219ENST00000534753 MDH1BQ5I0G3 518 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms