RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 TADA2BQ86TJ2 420 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 LONP2Q86WA8 852 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 GLIS3Q8NEA6 775 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 RUBCNQ92622 972 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 ACDQ96AP0 544 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 IRX2Q9BZI1 471 aaPredicted RBP11.06□□□□□ -0.64
CSDE1-217ENST00000534699 GZF1Q9H116 711 aaPredicted RBP11.06□□□□□ -0.64
CSDE1-217ENST00000534699 TMEM8AQ9HCN3 771 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 DMAP1Q9NPF5 467 aaPredicted RBP11.06□□□□□ -0.64
CSDE1-217ENST00000534699 A8MXQ7 604 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.06□□□□□ -0.64
CSDE1-217ENST00000534699 CST3P01034 146 aaPredicted RBP11.06□□□□□ -0.64
CSDE1-217ENST00000534699 GRIK1P39086 918 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 PSEN1P49768 467 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 NDUFA8P51970 172 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 BIRC3Q13489 604 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 MTF1Q14872 753 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 ZCWPW2Q504Y3 356 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 LAIR1Q6GTX8 287 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 KLHDC10Q6PID8 442 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 SPATA20Q8TB22 786 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 RSPRY1Q96DX4 576 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 PCED1BQ96HM7 432 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 METTL14Q9HCE5 456 aaKnown RBP11.06□□□□□ -0.64
CSDE1-217ENST00000534699 SPTBN5Q9NRC6 3674 aaKnown RBP11.06□□□□□ -0.64
CSDE1-217ENST00000534699 E2F8A0AVK6 867 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 GOLGA6L4A6NEF3 574 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 CETN3O15182 167 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 MYL6P60660 151 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 STIM1Q13586 685 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 ZNF658Q5TYW1 1059 aaPredicted RBP11.05□□□□□ -0.64
CSDE1-217ENST00000534699 ASCL5Q7RTU5 278 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 NOC3LQ8WTT2 800 aaKnown RBP11.05□□□□□ -0.64
CSDE1-217ENST00000534699 HPS3Q969F9 1004 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 CCDC127Q96BQ5 260 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 GKN1Q9NS71 199 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 GTF3C3Q9Y5Q9 886 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 TADA3O75528 432 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 ZDHHC11BP0C7U3 371 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 YWHAQP27348 245 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 CYP4F8P98187 520 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 CSTF1Q05048 431 aaKnown RBP11.05□□□□□ -0.64
CSDE1-217ENST00000534699 CCINQ13939 588 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 SCN4BQ8IWT1 228 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 FMR1NBQ8N0W7 255 aaPredicted RBP11.05□□□□□ -0.64
CSDE1-217ENST00000534699 SUMF1Q8NBK3 374 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 HNRNPABQ99729 332 aaKnown RBP11.05□□□□□ -0.64
CSDE1-217ENST00000534699 MRPL45Q9BRJ2 306 aaKnown RBP11.05□□□□□ -0.64
CSDE1-217ENST00000534699 RAB23Q9ULC3 237 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 KIAA1257Q9ULG3 409 aa11.05□□□□□ -0.64
CSDE1-217ENST00000534699 MUC6Q6W4X9 2439 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 A0A0A0MRY4 1105 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 P4HA2O15460 535 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 EPB41P11171 864 aaKnown RBP11.04□□□□□ -0.64
CSDE1-217ENST00000534699 GJA1P17302 382 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 CCNE1P24864 410 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 DPP6P42658 865 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 PKP1Q13835 747 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 KRT39Q6A163 491 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 FAM186BQ8IYM0 893 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 ADSSL1Q8N142 457 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 ARHGAP18Q8N392 663 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 MAB21L3Q8N8X9 362 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 DHTKD1Q96HY7 919 aaPredicted RBP11.04□□□□□ -0.64
CSDE1-217ENST00000534699 CEP63Q96MT8 703 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 B3GNT5Q9BYG0 378 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 ZNF840PA6NDX5 716 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 VNN1O95497 513 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 PRAMEF12O95522 483 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 OAS1P00973 400 aaKnown RBP11.04□□□□□ -0.64
CSDE1-217ENST00000534699 HDCP19113 662 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 NR2F2P24468 414 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 ACAT1P24752 427 aaKnown RBP11.04□□□□□ -0.64
CSDE1-217ENST00000534699 LMO2P25791 158 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 CYP27A1Q02318 531 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 DDR2Q16832 855 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 MDH1BQ5I0G3 518 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 NUDT18Q6ZVK8 323 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 SV2AQ7L0J3 742 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 RDH13Q8NBN7 331 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 FAM81BQ96LP2 452 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 NIF3L1Q9GZT8 377 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 FAM86C1Q9NVL1 165 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 DUS2Q9NX74 493 aaKnown RBP11.04□□□□□ -0.64
CSDE1-217ENST00000534699 ZNF510Q9Y2H8 683 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 COQ4Q9Y3A0 265 aa11.04□□□□□ -0.64
CSDE1-217ENST00000534699 MTF2Q9Y483 593 aaPredicted RBP11.04□□□□□ -0.64
CSDE1-217ENST00000534699 BDNFP23560 247 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 PIK3CAP42336 1068 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 MRPS21P82921 87 aaKnown RBP11.03□□□□□ -0.64
CSDE1-217ENST00000534699 FKBP3Q00688 224 aaKnown RBP11.03□□□□□ -0.64
CSDE1-217ENST00000534699 GOLGA8FQ08AF8 430 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 GOLGA8DPQ0D2H9 430 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 MTAPQ13126 283 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 ADAM9Q13443 819 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 FOXD4L5Q5VV16 416 aaPredicted RBP11.03□□□□□ -0.64
CSDE1-217ENST00000534699 FAM35AQ86V20 835 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 SCML4Q8N228 414 aa11.03□□□□□ -0.64
CSDE1-217ENST00000534699 FOXD4L4Q8WXT5 416 aaPredicted RBP11.03□□□□□ -0.64
CSDE1-217ENST00000534699 CD101Q93033 1021 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms