RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 USP28Q96RU2 1077 aa8.97□□□□□ -0.97
RPUSD4-209ENST00000534393 FNBP1Q96RU3 617 aa8.97□□□□□ -0.97
RPUSD4-209ENST00000534393 CYP2S1Q96SQ9 504 aa8.97□□□□□ -0.97
RPUSD4-209ENST00000534393 MMS19Q96T76 1030 aa8.97□□□□□ -0.97
RPUSD4-209ENST00000534393 SYT15Q9BQS2 421 aa8.97□□□□□ -0.97
RPUSD4-209ENST00000534393 SCAND2PQ9GZW5 306 aaPredicted RBP8.97□□□□□ -0.97
RPUSD4-209ENST00000534393 ARRDC1-AS1Q9H2J1 176 aa8.97□□□□□ -0.97
RPUSD4-209ENST00000534393 GDPD2Q9HCC8 539 aa8.97□□□□□ -0.97
RPUSD4-209ENST00000534393 KBTBD4Q9NVX7 518 aa8.97□□□□□ -0.97
RPUSD4-209ENST00000534393 C2orf42Q9NWW7 574 aa8.97□□□□□ -0.97
RPUSD4-209ENST00000534393 HSPBP1Q9NZL4 362 aa8.97□□□□□ -0.97
RPUSD4-209ENST00000534393 GCNT4Q9P109 453 aa8.97□□□□□ -0.97
RPUSD4-209ENST00000534393 CGNQ9P2M7 1197 aaKnown RBP8.97□□□□□ -0.97
RPUSD4-209ENST00000534393 EBF1Q9UH73 591 aa8.97□□□□□ -0.97
RPUSD4-209ENST00000534393 SIX4Q9UIU6 781 aa8.97□□□□□ -0.97
RPUSD4-209ENST00000534393 UBE4BO95155 1302 aa8.97□□□□□ -0.97
RPUSD4-209ENST00000534393 A0A087X0B3 334 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 TACC1O75410 805 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 TADA3O75528 432 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 TNNI1P19237 187 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 BDNFP23560 247 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 GNL1P36915 607 aaPredicted RBP8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 TNNC1P63316 161 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 NOP14P78316 857 aaKnown RBP8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 CYP27A1Q02318 531 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 DMC1Q14565 340 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 SNRNP35Q16560 246 aaKnown RBP8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 SKOR2Q2VWA4 1001 aaPredicted RBP8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 EML3Q32P44 896 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 ATL3Q6DD88 541 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 PKN3Q6P5Z2 889 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 TRAPPC11Q7Z392 1133 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 KBTBD6Q86V97 674 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 OSTM1Q86WC4 334 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 CBWD2Q8IUF1 395 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 ARL14EPQ8N8R7 260 aaPredicted RBP8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 LINC00301Q8NCQ3 95 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 TTC16Q8NEE8 873 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 OR5B17Q8NGF7 314 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 RPLP0P6Q8NHW5 317 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 MYCBPAPQ8TBZ2 947 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 SH3RF2Q8TEC5 729 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 KBTBD7Q8WVZ9 684 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 MYLPFQ96A32 169 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 CHFRQ96EP1 664 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 SPATA32Q96LK8 384 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 C8orf48Q96LL4 319 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 CNTNAP3BQ96NU0 1288 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 SLITRK1Q96PX8 696 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 SLC22A12Q96S37 553 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 CNTNAP3Q9BZ76 1288 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 TRIM9Q9C026 710 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 ELOVL4Q9GZR5 314 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 SNX25Q9H3E2 840 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 MAGEF1Q9HAY2 307 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 FBRSL1Q9HCM7 1045 aaKnown RBP8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 VPS45Q9NRW7 570 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 LMBRD1Q9NUN5 540 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 WNT6Q9Y6F9 365 aa8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 KMT2BQ9UMN6 2715 aaPredicted RBP8.96□□□□□ -0.98
RPUSD4-209ENST00000534393 PLXND1Q9Y4D7 1925 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 SPTLC2O15270 562 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 GDF9O60383 454 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 CUTAO60888 179 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 ATP2C2O75185 946 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 YEATS4O95619 227 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 STAU1O95793 577 aaKnown RBP8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 PDGFRBP09619 1106 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 LMO2P25791 158 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 ATICP31939 592 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 MPLP40238 635 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 PXNP49023 591 aaPredicted RBP8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 ASIC1P78348 528 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 SLC7A9P82251 487 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 MRPS21P82921 87 aaKnown RBP8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 PSMD2Q13200 908 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 TRPC3Q13507 836 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 PSMD6Q15008 389 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 HSF5Q4G112 596 aaPredicted RBP8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 USP39Q53GS9 565 aaKnown RBP8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 PLA2G2CQ5R387 149 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 FAM26FQ5R3K3 315 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 TDRD10Q5VZ19 366 aaKnown RBP8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 LMBRD2Q68DH5 695 aaPredicted RBP8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 EPM2AIP1Q7L775 607 aaPredicted RBP8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 DDX42Q86XP3 938 aaKnown RBP eCLIP8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 XXYLT1Q8NBI6 393 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 STKLD1Q8NE28 680 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 PDZD8Q8NEN9 1154 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 RIN3Q8TB24 985 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 GOLGA5Q8TBA6 731 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 SYAP1Q96A49 352 aaPredicted RBP8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 PCED1BQ96HM7 432 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 TTLL2Q9BWV7 592 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 FGFBP2Q9BYJ0 223 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 CRTAC1Q9NQ79 661 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 LAMA1P25391 3075 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 PCNX2A6NKB5 2137 aa8.95□□□□□ -0.98
RPUSD4-209ENST00000534393 C2orf78A6NCI8 922 aa8.94□□□□□ -0.98
RPUSD4-209ENST00000534393 ZNF840PA6NDX5 716 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms