RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 ICA1LQ8NDH6 482 aa17.92■□□□□ 0.46
PHRF1-206ENST00000534320 GIPC2Q8TF65 315 aa17.92■□□□□ 0.46
PHRF1-206ENST00000534320 BAP1Q92560 729 aa17.92■□□□□ 0.46
PHRF1-206ENST00000534320 RMDN1Q96DB5 314 aa17.92■□□□□ 0.46
PHRF1-206ENST00000534320 KLF6Q99612 283 aaPredicted RBP17.92■□□□□ 0.46
PHRF1-206ENST00000534320 ITGA11Q9UKX5 1188 aa17.92■□□□□ 0.46
PHRF1-206ENST00000534320 SYCE1LA8MT33 242 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 DEAF1O75398 565 aaPredicted RBP17.91■□□□□ 0.46
PHRF1-206ENST00000534320 BCAT1P54687 386 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 GEMIN4P57678 1058 aaKnown RBP17.91■□□□□ 0.46
PHRF1-206ENST00000534320 ELMSAN1Q6PJG2 1045 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 EPS8L3Q8TE67 593 aaKnown RBP17.91■□□□□ 0.46
PHRF1-206ENST00000534320 HDAC7Q8WUI4 952 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 VCPIP1Q96JH7 1222 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 TMBIM4Q9HC24 238 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 TBC1D23Q9NUY8 699 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 H3BQF6 201 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 ODC1P11926 461 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 FAM172AQ8WUF8 416 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 MRPL40Q9NQ50 206 aaKnown RBP17.91■□□□□ 0.46
PHRF1-206ENST00000534320 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.91■□□□□ 0.46
PHRF1-206ENST00000534320 ADORA2AP29274 412 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 KLC1Q07866 573 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 TFB1MQ8WVM0 346 aaKnown RBP17.91■□□□□ 0.46
PHRF1-206ENST00000534320 PCMTD2Q9NV79 361 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 VAV3Q9UKW4 847 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 USP18Q9UMW8 372 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 LZTS1Q9Y250 596 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 GPR182O15218 404 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 HMBSP08397 361 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 PBX1P40424 430 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 FLOT2Q14254 428 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 SLC9A9Q8IVB4 645 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 ADGRF2Q8IZF7 708 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 ZNF229Q9UJW7 825 aa17.91■□□□□ 0.46
PHRF1-206ENST00000534320 UBA6A0AVT1 1052 aaPredicted RBP17.9■□□□□ 0.46
PHRF1-206ENST00000534320 ZSCAN5CA6NGD5 496 aaPredicted RBP17.9■□□□□ 0.46
PHRF1-206ENST00000534320 MTSS1O43312 755 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 AP1G2O75843 785 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 BMT2Q1RMZ1 405 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 ARSHQ5FYA8 562 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 TMEM161BQ8NDZ6 487 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 THAP11Q96EK4 314 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 SMYD3Q9H7B4 428 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 CATSPERBQ9H7T0 1116 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 SUN2Q9UH99 717 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 CYB561D2O14569 222 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 POLBP06746 335 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 ERVK-9P63128 1117 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 CYLC2Q14093 348 aaPredicted RBP17.9■□□□□ 0.46
PHRF1-206ENST00000534320 MAP1SQ66K74 1059 aaPredicted RBP17.9■□□□□ 0.46
PHRF1-206ENST00000534320 IRF2BP1Q8IU81 584 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 CDCA5Q96FF9 252 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 ASB7Q9H672 318 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 SARS2Q9NP81 518 aaKnown RBP17.9■□□□□ 0.46
PHRF1-206ENST00000534320 DDIT4Q9NX09 232 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 CCDC78A2IDD5 438 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 B3GAT3O94766 335 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 MAPRE1Q15691 268 aaKnown RBP17.9■□□□□ 0.46
PHRF1-206ENST00000534320 UGP2Q16851 508 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 KAT5Q92993 513 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 PABPC5Q96DU9 382 aaKnown RBP17.9■□□□□ 0.46
PHRF1-206ENST00000534320 GLT1D1Q96MS3 346 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 SH3GL2Q99962 352 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 NPHS2Q9NP85 383 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 E5RI56 91 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 ATP9AO75110 1047 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 ACO1P21399 889 aaKnown RBP17.9■□□□□ 0.46
PHRF1-206ENST00000534320 FAXCQ5TGI0 409 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 PCDHA3Q9Y5H8 950 aa17.9■□□□□ 0.46
PHRF1-206ENST00000534320 ADRB2P07550 413 aa17.89■□□□□ 0.46
PHRF1-206ENST00000534320 PYGMP11217 842 aa17.89■□□□□ 0.46
PHRF1-206ENST00000534320 TTC39BQ5VTQ0 682 aaPredicted RBP17.89■□□□□ 0.46
PHRF1-206ENST00000534320 RNF180Q86T96 592 aa17.89■□□□□ 0.46
PHRF1-206ENST00000534320 RXFP2Q8WXD0 754 aa17.89■□□□□ 0.46
PHRF1-206ENST00000534320 SEPT5Q99719 369 aaPredicted RBP17.89■□□□□ 0.46
PHRF1-206ENST00000534320 CDC42EP4Q9H3Q1 356 aaKnown RBP17.89■□□□□ 0.46
PHRF1-206ENST00000534320 GPATCH2LQ9NWQ4 482 aa17.89■□□□□ 0.46
PHRF1-206ENST00000534320 BARX2Q9UMQ3 279 aaPredicted RBP17.89■□□□□ 0.46
PHRF1-206ENST00000534320 DGKZQ13574 1117 aa17.89■□□□□ 0.45
PHRF1-206ENST00000534320 TMTC4Q5T4D3 741 aa17.89■□□□□ 0.45
PHRF1-206ENST00000534320 LVRNQ6Q4G3 990 aa17.89■□□□□ 0.45
PHRF1-206ENST00000534320 TMEM134Q9H6X4 195 aa17.89■□□□□ 0.45
PHRF1-206ENST00000534320 AVENQ9NQS1 362 aaPredicted RBP17.89■□□□□ 0.45
PHRF1-206ENST00000534320 SNTG2Q9NY99 539 aa17.89■□□□□ 0.45
PHRF1-206ENST00000534320 NFASCO94856 1347 aa17.89■□□□□ 0.45
PHRF1-206ENST00000534320 EPHB2P29323 1055 aa17.89■□□□□ 0.45
PHRF1-206ENST00000534320 STX3Q13277 289 aa17.89■□□□□ 0.45
PHRF1-206ENST00000534320 TMEM132BQ14DG7 1078 aa17.89■□□□□ 0.45
PHRF1-206ENST00000534320 EPS8L1Q8TE68 723 aa17.89■□□□□ 0.45
PHRF1-206ENST00000534320 DDX50Q9BQ39 737 aaKnown RBP17.89■□□□□ 0.45
PHRF1-206ENST00000534320 TMEM121Q9BTD3 319 aa17.89■□□□□ 0.45
PHRF1-206ENST00000534320 MAP3K6O95382 1288 aa17.89■□□□□ 0.45
PHRF1-206ENST00000534320 ESRRBO95718 433 aa17.89■□□□□ 0.45
PHRF1-206ENST00000534320 DAB2P98082 770 aa17.89■□□□□ 0.45
PHRF1-206ENST00000534320 FBXO47Q5MNV8 452 aa17.89■□□□□ 0.45
PHRF1-206ENST00000534320 GJC2Q5T442 439 aaPredicted RBP17.89■□□□□ 0.45
PHRF1-206ENST00000534320 ZBTB22O15209 634 aa17.88■□□□□ 0.45
PHRF1-206ENST00000534320 HNRNPH3P31942 346 aaKnown RBP17.88■□□□□ 0.45
PHRF1-206ENST00000534320 AGR3Q8TD06 166 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms