RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 MAB21L3Q8N8X9 362 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 C12orf29Q8N999 325 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 SLC2A14Q8TDB8 520 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 TATDN2Q93075 761 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 SMARCD1Q96GM5 515 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 HEXIM2Q96MH2 286 aaKnown RBP12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 LRFN3Q9BTN0 628 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 LRRC3Q9BY71 257 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 GPR88Q9GZN0 384 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 ZDBF2Q9HCK1 2354 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 GREB1Q4ZG55 1949 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 NUP210Q8TEM1 1887 aaPredicted RBP12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 PRR33A8MZF0 331 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 GPR37L1O60883 481 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 CILPO75339 1184 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 MOSPD3O75425 235 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 ECI2O75521 394 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 MICAL2O94851 1124 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 FAM200BP0CF97 657 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 SRFP11831 508 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 CD19P15391 556 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 HMGA1P17096 107 aaKnown RBP12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 AVPR1AP37288 418 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 INCA1Q0VD86 236 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 KCNH2Q12809 1159 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 CUL2Q13617 745 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 HFE2Q6ZVN8 426 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 TRIM59Q8IWR1 403 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 TTC39CQ8N584 583 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 FLCNQ8NFG4 579 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 ASB16Q96NS5 453 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 TWNKQ96RR1 684 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 INTS2Q9H0H0 1204 aaKnown RBP12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 SMG9Q9H0W8 520 aaKnown RBP12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 BRD9Q9H8M2 597 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 IL21Q9HBE4 155 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 DMAP1Q9NPF5 467 aaPredicted RBP12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 C11orf16Q9NQ32 467 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 CISHQ9NSE2 258 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 EHD2Q9NZN4 543 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 GCNT4Q9P109 453 aa12.17□□□□□ -0.46
UBASH3B-208ENST00000533451 NOL4O94818 638 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 PDGFBP01127 241 aaPredicted RBP12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 CKMP06732 381 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 TBXAS1P24557 533 aaPredicted RBP12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 ERCC5P28715 1186 aaPredicted RBP12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 CACNA2D1P54289 1103 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 MAP3K7CLP57077 242 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 GPC5P78333 572 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 STX1AQ16623 288 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 TXNDC8Q6A555 127 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 CAVIN1Q6NZI2 390 aaKnown RBP12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 ARID3BQ8IVW6 561 aaPredicted RBP12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 ELSPBP1Q96BH3 223 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 CYFIP2Q96F07 1278 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 SPATA17Q96L03 361 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 C8orf48Q96LL4 319 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 SLITRK1Q96PX8 696 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 KCNK16Q96T55 309 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 CRACR2AQ9BSW2 395 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 TRMT61BQ9BVS5 477 aaKnown RBP12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 THAP9Q9H5L6 903 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 TASP1Q9H6P5 420 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 TRPM5Q9NZQ8 1165 aa12.16□□□□□ -0.46
UBASH3B-208ENST00000533451 HEPACAM2A8MVW5 462 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 P4HA2O15460 535 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 RTN3O95197 1032 aaPredicted RBP12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 KRT5P13647 590 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 FCARP24071 287 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 YWHAQP27348 245 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 GDI1P31150 447 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 MARSP56192 900 aaKnown RBP12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 USP46P62068 366 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 TMEM270Q6UE05 265 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 RRAGAQ7L523 313 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 CMTM8Q8IZV2 173 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 FUKQ8N0W3 1084 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 NUP93Q8N1F7 819 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 CRYBG2Q8N1P7 616 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 FBXO32Q969P5 355 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 E2F7Q96AV8 911 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 TRMT2BQ96GJ1 504 aaKnown RBP12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 TMEM176AQ96HP8 235 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 PLA2G2FQ9BZM2 168 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 ARHGEF3Q9NR81 526 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 TMEM30AQ9NV96 361 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 ANO10Q9NW15 660 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 COQ4Q9Y3A0 265 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 HCN4Q9Y3Q4 1203 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 PCDHB4Q9Y5E5 795 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 TICRRQ7Z2Z1 1910 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 ANAPC1Q9H1A4 1944 aa12.15□□□□□ -0.46
UBASH3B-208ENST00000533451 TRAV19A0A0A6YYK7 116 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 KCNJ18B7U540 433 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 ZNF263O14978 683 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 PRAMEF12O95522 483 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 F11P03951 625 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 TPM2P07951 284 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 PSMC3P17980 439 aa12.14□□□□□ -0.47
UBASH3B-208ENST00000533451 DDX6P26196 483 aaKnown RBP eCLIP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms