RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 OBP2AQ9NY56 170 aa21.69■■□□□ 1.06
CCS-208ENST00000533244 IL37Q9NZH6 218 aa21.69■■□□□ 1.06
CCS-208ENST00000533244 ZDBF2Q9HCK1 2354 aa21.68■■□□□ 1.06
CCS-208ENST00000533244 BEST1O76090 585 aa21.68■■□□□ 1.06
CCS-208ENST00000533244 PRAMEF12O95522 483 aa21.68■■□□□ 1.06
CCS-208ENST00000533244 CFHP08603 1231 aa21.68■■□□□ 1.06
CCS-208ENST00000533244 ACO1P21399 889 aaKnown RBP21.68■■□□□ 1.06
CCS-208ENST00000533244 YWHAEP62258 255 aaKnown RBP21.68■■□□□ 1.06
CCS-208ENST00000533244 CMTM8Q8IZV2 173 aa21.68■■□□□ 1.06
CCS-208ENST00000533244 NUP93Q8N1F7 819 aa21.68■■□□□ 1.06
CCS-208ENST00000533244 ENOX1Q8TC92 643 aaKnown RBP21.68■■□□□ 1.06
CCS-208ENST00000533244 PBXIP1Q96AQ6 731 aa21.68■■□□□ 1.06
CCS-208ENST00000533244 INTS2Q9H0H0 1204 aaKnown RBP21.68■■□□□ 1.06
CCS-208ENST00000533244 COL4A2P08572 1712 aa21.67■■□□□ 1.06
CCS-208ENST00000533244 FAM92AA1XBS5 289 aa21.67■■□□□ 1.06
CCS-208ENST00000533244 HEPACAM2A8MVW5 462 aa21.67■■□□□ 1.06
CCS-208ENST00000533244 PDGFBP01127 241 aaPredicted RBP21.67■■□□□ 1.06
CCS-208ENST00000533244 FAM200BP0CF97 657 aa21.67■■□□□ 1.06
CCS-208ENST00000533244 PSMC3P17980 439 aa21.67■■□□□ 1.06
CCS-208ENST00000533244 GCNT1Q02742 428 aa21.67■■□□□ 1.06
CCS-208ENST00000533244 PPP1R26Q5T8A7 1209 aaPredicted RBP21.67■■□□□ 1.06
CCS-208ENST00000533244 ARHGAP17Q68EM7 881 aa21.67■■□□□ 1.06
CCS-208ENST00000533244 TXNDC8Q6A555 127 aa21.67■■□□□ 1.06
CCS-208ENST00000533244 SASS6Q6UVJ0 657 aa21.67■■□□□ 1.06
CCS-208ENST00000533244 CLEC20AQ6ZU45 233 aa21.67■■□□□ 1.06
CCS-208ENST00000533244 ARHGEF19Q8IW93 802 aa21.67■■□□□ 1.06
CCS-208ENST00000533244 MFSD6LQ8IWD5 586 aa21.67■■□□□ 1.06
CCS-208ENST00000533244 ANO10Q9NW15 660 aa21.67■■□□□ 1.06
CCS-208ENST00000533244 ZNF318Q5VUA4 2279 aa21.67■■□□□ 1.06
CCS-208ENST00000533244 KIF26AQ9ULI4 1882 aaPredicted RBP21.67■■□□□ 1.06
CCS-208ENST00000533244 GTPBP10A4D1E9 387 aaKnown RBP21.66■■□□□ 1.06
CCS-208ENST00000533244 KRBA1A5PL33 1030 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 RTN3O95197 1032 aaPredicted RBP21.66■■□□□ 1.06
CCS-208ENST00000533244 ADORA2BP29275 332 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 MTIF2P46199 727 aaKnown RBP21.66■■□□□ 1.06
CCS-208ENST00000533244 PPP3CCP48454 512 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 SLC5A3P53794 718 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 FCHO2Q0JRZ9 810 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 STX1AQ16623 288 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 MAN2A1Q16706 1144 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 PPM1KQ8N3J5 372 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 FBXL6Q8N531 539 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 MAB21L3Q8N8X9 362 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 KAT5Q92993 513 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 HEXIM2Q96MH2 286 aaKnown RBP21.66■■□□□ 1.06
CCS-208ENST00000533244 LRRC3BQ96PB8 259 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 PNPLA8Q9NP80 782 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 SAMSN1Q9NSI8 373 aaKnown RBP21.66■■□□□ 1.06
CCS-208ENST00000533244 COMMD8Q9NX08 183 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 GCNT4Q9P109 453 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 FBXL21Q9UKT6 434 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 NFE2L3Q9Y4A8 694 aa21.66■■□□□ 1.06
CCS-208ENST00000533244 HHLA1C9JL84 531 aa21.65■■□□□ 1.06
CCS-208ENST00000533244 MAP3K7CLP57077 242 aa21.65■■□□□ 1.06
CCS-208ENST00000533244 PFKPQ01813 784 aa21.65■■□□□ 1.06
CCS-208ENST00000533244 GRM2Q14416 872 aa21.65■■□□□ 1.06
CCS-208ENST00000533244 PHLDB3Q6NSJ2 640 aa21.65■■□□□ 1.06
CCS-208ENST00000533244 C11orf57Q6ZUT1 292 aaPredicted RBP21.65■■□□□ 1.06
CCS-208ENST00000533244 OVCA2Q8WZ82 227 aa21.65■■□□□ 1.06
CCS-208ENST00000533244 TRMT61BQ9BVS5 477 aaKnown RBP21.65■■□□□ 1.06
CCS-208ENST00000533244 TRPV5Q9NQA5 729 aa21.65■■□□□ 1.06
CCS-208ENST00000533244 TRPM5Q9NZQ8 1165 aa21.65■■□□□ 1.06
CCS-208ENST00000533244 ZNF840PA6NDX5 716 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 NPR3P17342 541 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 PFKLP17858 780 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 YWHAQP27348 245 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 AVPR1AP37288 418 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 TAF10Q12962 218 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 ZNF268Q14587 947 aaPredicted RBP21.64■■□□□ 1.06
CCS-208ENST00000533244 MIIPQ5JXC2 388 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 IER5LQ5T953 404 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 CREBRFQ8IUR6 639 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 SIX5Q8N196 739 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 SCAMP5Q8TAC9 235 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 DNASE1L2Q92874 299 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 KREMEN1Q96MU8 473 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 SLITRK1Q96PX8 696 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 SLC22A12Q96S37 553 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 DUSP16Q9BY84 665 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 ARHGEF3Q9NR81 526 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 MYH10P35580 1976 aa21.64■■□□□ 1.06
CCS-208ENST00000533244 ARNTLO00327 626 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 EEF1GP26641 437 aaKnown RBP21.63■■□□□ 1.05
CCS-208ENST00000533244 CDKAL1Q5VV42 579 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 TRIM65Q6PJ69 517 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 GBP6Q6ZN66 633 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 RRAGAQ7L523 313 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 GPIHBP1Q8IV16 184 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 CELF5Q8N6W0 485 aaKnown RBP21.63■■□□□ 1.05
CCS-208ENST00000533244 PDZD8Q8NEN9 1154 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 USP13Q92995 863 aaPredicted RBP21.63■■□□□ 1.05
CCS-208ENST00000533244 JAKMIP2Q96AA8 810 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 TUBGCP2Q9BSJ2 902 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 CRACR2AQ9BSW2 395 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 SMG9Q9H0W8 520 aaKnown RBP21.63■■□□□ 1.05
CCS-208ENST00000533244 KIF9Q9HAQ2 790 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 TDP1Q9NUW8 608 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 CA14Q9ULX7 337 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 CNTN6Q9UQ52 1028 aa21.63■■□□□ 1.05
CCS-208ENST00000533244 CCL26Q9Y258 94 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms