RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 RBM43Q6ZSC3 357 aaKnown RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 SYDE1Q6ZW31 735 aaPredicted RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 RAPH1Q70E73 1250 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 UNC13DQ70J99 1090 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 KCTD1Q719H9 257 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 ANO5Q75V66 913 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 CACNA2D4Q7Z3S7 1137 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 RNF180Q86T96 592 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 DDX53Q86TM3 631 aaKnown RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 AMIGO3Q86WK7 504 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 MIB1Q86YT6 1006 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 SPATA2LQ8IUW3 424 aaPredicted RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 NOSTRINQ8IVI9 506 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 CADM3Q8N126 398 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 NXPE1Q8N323 547 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 OR7G1Q8NGA0 311 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 OTUD7AQ8TE49 926 aaPredicted RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 MZB1Q8WU39 189 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 SGK3Q96BR1 496 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 ARL5BQ96KC2 179 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 OLFM3Q96PB7 478 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 SECISBP2Q96T21 854 aaKnown RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 TTC1Q99614 292 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 CENPKQ9BS16 269 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 DESI2Q9BSY9 194 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 MRPL9Q9BYD2 267 aaKnown RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 STMN4Q9H169 189 aaPredicted RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 ACAD9Q9H845 621 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 UCK1Q9HA47 277 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 TRIM10Q9UDY6 481 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 KIAA1257Q9ULG3 409 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 PNMA8BQ9ULN7 279 aaPredicted RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 COL4A3BPQ9Y5P4 624 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 HECW1Q76N89 1606 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 WDR7Q9Y4E6 1490 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 BCL9O00512 1426 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 NUP155O75694 1391 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 MAP3K19Q56UN5 1328 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 IRS2Q9Y4H2 1338 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 MACROD2A1Z1Q3 448 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 PTPDC1A2A3K4 754 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 WDR91A4D1P6 747 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 FAM90A27PA6NNH2 459 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 LACTBL1A8MY62 500 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 AKR1B15C9JRZ8 316 aaPredicted RBP5.82□□□□□ -1.48
CD44-236ENST00000533222 E7EVH7 732 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 H3BQV1 296 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 ACOT7O00154 380 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 TRDMT1O14717 391 aaKnown RBP5.82□□□□□ -1.48
CD44-236ENST00000533222 AREL1O15033 823 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 N4BP3O15049 544 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 FIBPO43427 364 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 SERPINB7O75635 380 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 KRT37O76014 449 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 ZBTB7AO95365 584 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 NCAM1P13591 858 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 PRLRP16471 622 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 YBX3P16989 372 aaKnown RBP eCLIP5.82□□□□□ -1.48
CD44-236ENST00000533222 ATP6V1C1P21283 382 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 PRKACBP22694 351 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 CFL1P23528 166 aaKnown RBP5.82□□□□□ -1.48
CD44-236ENST00000533222 THBS2P35442 1172 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 STAT6P42226 847 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 POLD2P49005 469 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 RGS7P49802 495 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 CYP4F2P78329 520 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 DLG4P78352 724 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 CASP8Q14790 479 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 SLC9A5Q14940 896 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 LEXMQ3ZCV2 418 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 ANO1Q5XXA6 986 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 OLFML2BQ68BL8 750 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 PLBD1Q6P4A8 553 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 ZNF600Q6ZNG1 722 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 TAOK1Q7L7X3 1001 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 FAM126BQ8IXS8 530 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 SPICE1Q8N0Z3 855 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.82□□□□□ -1.48
CD44-236ENST00000533222 CHST14Q8NCH0 376 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 SHCBP1Q8NEM2 672 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 OR52K2Q8NGK3 314 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 SEPT8Q92599 483 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 PGBD4Q96DM1 585 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 ART5Q96L15 291 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 COG8Q96MW5 612 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 API5Q9BZZ5 524 aaKnown RBP5.82□□□□□ -1.48
CD44-236ENST00000533222 HAUS4Q9H6D7 363 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 SCPEP1Q9HB40 452 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 SH3GLB2Q9NR46 395 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 INIPQ9NRY2 104 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 GIN1Q9NXP7 522 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 TAS2R7Q9NYW3 318 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 H2AFY2Q9P0M6 372 aaPredicted RBP5.82□□□□□ -1.48
CD44-236ENST00000533222 ZNHIT2Q9UHR6 403 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 TEKT2Q9UIF3 430 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 WASF3Q9UPY6 502 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 CNPY2Q9Y2B0 182 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 LMTK2Q8IWU2 1503 aa5.82□□□□□ -1.48
CD44-236ENST00000533222 NAIPQ13075 1403 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms