RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 FGF18O76093 207 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 ARHGEF15O94989 841 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 PPM1AP35813 382 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 GABPB1Q06547 395 aaPredicted RBP19.51■□□□□ 0.71
SMPD1-208ENST00000533123 C11orf63Q6NUN7 778 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 PRSS55Q6UWB4 352 aaPredicted RBP19.51■□□□□ 0.71
SMPD1-208ENST00000533123 MMS22LQ6ZRQ5 1243 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 SPRED2Q7Z698 418 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 FUKQ8N0W3 1084 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 MYCBPAPQ8TBZ2 947 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 TRIM7Q9C029 511 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 RBM12Q9NTZ6 932 aaKnown RBP19.51■□□□□ 0.71
SMPD1-208ENST00000533123 TMLHEQ9NVH6 421 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 DDX3YO15523 660 aaKnown RBP19.5■□□□□ 0.71
SMPD1-208ENST00000533123 SOD2P04179 222 aa19.5■□□□□ 0.71
SMPD1-208ENST00000533123 TSPY1Q01534 308 aa19.5■□□□□ 0.71
SMPD1-208ENST00000533123 KIAA1841Q6NSI8 718 aa19.5■□□□□ 0.71
SMPD1-208ENST00000533123 FAM171BQ6P995 826 aa19.5■□□□□ 0.71
SMPD1-208ENST00000533123 PAQR9Q6ZVX9 377 aa19.5■□□□□ 0.71
SMPD1-208ENST00000533123 TTC30AQ86WT1 665 aa19.5■□□□□ 0.71
SMPD1-208ENST00000533123 KLHL23Q8NBE8 558 aa19.5■□□□□ 0.71
SMPD1-208ENST00000533123 MSANTD4Q8NCY6 345 aa19.5■□□□□ 0.71
SMPD1-208ENST00000533123 CHST7Q9NS84 486 aa19.5■□□□□ 0.71
SMPD1-208ENST00000533123 UVRAGQ9P2Y5 699 aa19.5■□□□□ 0.71
SMPD1-208ENST00000533123 CYTH4Q9UIA0 394 aa19.5■□□□□ 0.71
SMPD1-208ENST00000533123 CEP83Q9Y592 693 aa19.5■□□□□ 0.71
SMPD1-208ENST00000533123 CARNS1A5YM72 827 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 CEP104O60308 925 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 COMTP21964 271 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 GPD2P43304 727 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 STILQ15468 1287 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 DCAF12L1Q5VU92 463 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 ZNF280DQ6N043 979 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 RSPO2Q6UXX9 243 aaPredicted RBP19.49■□□□□ 0.71
SMPD1-208ENST00000533123 TMEM35BQ8NCS4 154 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 RIN2Q8WYP3 895 aaPredicted RBP19.49■□□□□ 0.71
SMPD1-208ENST00000533123 PKMYT1Q99640 499 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 MED10Q9BTT4 135 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 B3GNT5Q9BYG0 378 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 LHX5Q9H2C1 402 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 ADAM22Q9P0K1 906 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 MTUS1Q9ULD2 1270 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 CA3P07451 260 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 MARCKSL1P49006 195 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 TUBB4BP68371 445 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 MRPS25P82663 173 aaKnown RBP19.49■□□□□ 0.71
SMPD1-208ENST00000533123 ANKS3Q6ZW76 656 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 DDX53Q86TM3 631 aaKnown RBP19.49■□□□□ 0.71
SMPD1-208ENST00000533123 PHF13Q86YI8 300 aaPredicted RBP19.49■□□□□ 0.71
SMPD1-208ENST00000533123 VPS52Q8N1B4 723 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 HNRNPABQ99729 332 aaKnown RBP19.49■□□□□ 0.71
SMPD1-208ENST00000533123 C17orf80Q9BSJ5 609 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 HESX1Q9UBX0 185 aa19.49■□□□□ 0.71
SMPD1-208ENST00000533123 TULP2O00295 520 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 LSM8O95777 96 aaKnown RBP19.48■□□□□ 0.71
SMPD1-208ENST00000533123 CDH5P33151 784 aaPredicted RBP19.48■□□□□ 0.71
SMPD1-208ENST00000533123 CTNNB1P35222 781 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 BMPR1AP36894 532 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 ARPP19P56211 112 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 KRT17Q04695 432 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 PTP4A2Q12974 167 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 SLC39A12Q504Y0 691 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 PKDCCQ504Y2 493 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 GBF1Q92538 1859 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 ALG3Q92685 438 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 KRT35Q92764 455 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 MYLPFQ96A32 169 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 PBKQ96KB5 322 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 RNF14Q9UBS8 474 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 ANAPC7Q9UJX3 599 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 CES2O00748 559 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 CAPN15O75808 1086 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 MYBL1P10243 752 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 RPL17P18621 184 aaKnown RBP19.48■□□□□ 0.71
SMPD1-208ENST00000533123 DNAJB2P25686 324 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 PBX2P40425 430 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 ITIH3Q06033 890 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 ANKRD52Q8NB46 1076 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 TRIM11Q96F44 468 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 RHOBTB2Q9BYZ6 727 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 ZNF518BQ9C0D4 1074 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 ZCWPW1Q9H0M4 648 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 AVENQ9NQS1 362 aaPredicted RBP19.48■□□□□ 0.71
SMPD1-208ENST00000533123 ZNF446Q9NWS9 450 aa19.48■□□□□ 0.71
SMPD1-208ENST00000533123 GJB6O95452 261 aa19.47■□□□□ 0.71
SMPD1-208ENST00000533123 PLCB3Q01970 1234 aa19.47■□□□□ 0.71
SMPD1-208ENST00000533123 PDE4CQ08493 712 aa19.47■□□□□ 0.71
SMPD1-208ENST00000533123 AUTS2Q8WXX7 1259 aa19.47■□□□□ 0.71
SMPD1-208ENST00000533123 CALR3Q96L12 384 aaKnown RBP19.47■□□□□ 0.71
SMPD1-208ENST00000533123 ALG13Q9NP73 1137 aaKnown RBP19.47■□□□□ 0.71
SMPD1-208ENST00000533123 H7C4K7 107 aa19.47■□□□□ 0.71
SMPD1-208ENST00000533123 TBC1D4O60343 1298 aa19.47■□□□□ 0.71
SMPD1-208ENST00000533123 MMP8P22894 467 aa19.47■□□□□ 0.71
SMPD1-208ENST00000533123 GLUD2P49448 558 aa19.47■□□□□ 0.71
SMPD1-208ENST00000533123 VSNL1P62760 191 aa19.47■□□□□ 0.71
SMPD1-208ENST00000533123 MAPRE1Q15691 268 aaKnown RBP19.47■□□□□ 0.71
SMPD1-208ENST00000533123 PSMD5Q16401 504 aa19.47■□□□□ 0.71
SMPD1-208ENST00000533123 MMGT1Q8N4V1 131 aa19.47■□□□□ 0.71
SMPD1-208ENST00000533123 PIK3R5Q8WYR1 880 aa19.47■□□□□ 0.71
SMPD1-208ENST00000533123 HINFPQ9BQA5 517 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms