RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 PKN3Q6P5Z2 889 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 SH3RF2Q8TEC5 729 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 ATP2A3Q93084 1043 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 CHFRQ96EP1 664 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 P2RY13Q9BPV8 354 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 ECT2Q9H8V3 914 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 PARD6AQ9NPB6 346 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 EHD2Q9NZN4 543 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 CGNQ9P2M7 1197 aaKnown RBP19.01■□□□□ 0.63
PCF11-206ENST00000533018 SERTAD1Q9UHV2 236 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 HELZP42694 1942 aaKnown RBP19■□□□□ 0.63
PCF11-206ENST00000533018 RNF40O75150 1001 aa19■□□□□ 0.63
PCF11-206ENST00000533018 TACC1O75410 805 aa19■□□□□ 0.63
PCF11-206ENST00000533018 PTPN1P18031 435 aaKnown RBP19■□□□□ 0.63
PCF11-206ENST00000533018 DRD1P21728 446 aa19■□□□□ 0.63
PCF11-206ENST00000533018 GJA4P35212 333 aa19■□□□□ 0.63
PCF11-206ENST00000533018 CASP4P49662 377 aa19■□□□□ 0.63
PCF11-206ENST00000533018 PDE6CP51160 858 aa19■□□□□ 0.63
PCF11-206ENST00000533018 MYL6P60660 151 aa19■□□□□ 0.63
PCF11-206ENST00000533018 IFRD2Q12894 506 aaPredicted RBP19■□□□□ 0.63
PCF11-206ENST00000533018 PSMD2Q13200 908 aa19■□□□□ 0.63
PCF11-206ENST00000533018 BIRC3Q13489 604 aa19■□□□□ 0.63
PCF11-206ENST00000533018 ZNF77Q15935 545 aa19■□□□□ 0.63
PCF11-206ENST00000533018 ZNF516Q92618 1163 aa19■□□□□ 0.63
PCF11-206ENST00000533018 FBRSL1Q9HCM7 1045 aaKnown RBP19■□□□□ 0.63
PCF11-206ENST00000533018 SPTBN2O15020 2390 aa18.99■□□□□ 0.63
PCF11-206ENST00000533018 SPAG17Q6Q759 2223 aa18.99■□□□□ 0.63
PCF11-206ENST00000533018 MED19A0JLT2 244 aaPredicted RBP18.99■□□□□ 0.63
PCF11-206ENST00000533018 F8VP50 259 aa18.99■□□□□ 0.63
PCF11-206ENST00000533018 USP46P62068 366 aa18.99■□□□□ 0.63
PCF11-206ENST00000533018 NR1H3Q13133 447 aa18.99■□□□□ 0.63
PCF11-206ENST00000533018 BMT2Q1RMZ1 405 aa18.99■□□□□ 0.63
PCF11-206ENST00000533018 WDR5BQ86VZ2 330 aa18.99■□□□□ 0.63
PCF11-206ENST00000533018 GOLGA5Q8TBA6 731 aa18.99■□□□□ 0.63
PCF11-206ENST00000533018 SYAP1Q96A49 352 aaPredicted RBP18.99■□□□□ 0.63
PCF11-206ENST00000533018 CEP295NLQ96MC4 621 aa18.99■□□□□ 0.63
PCF11-206ENST00000533018 DPEP3Q9H4B8 488 aa18.99■□□□□ 0.63
PCF11-206ENST00000533018 EXOC1Q9NV70 894 aa18.99■□□□□ 0.63
PCF11-206ENST00000533018 GCNT4Q9P109 453 aa18.99■□□□□ 0.63
PCF11-206ENST00000533018 SLFN14P0C7P3 912 aa18.98■□□□□ 0.63
PCF11-206ENST00000533018 CCDC192P0DO97 292 aa18.98■□□□□ 0.63
PCF11-206ENST00000533018 TGM1P22735 817 aa18.98■□□□□ 0.63
PCF11-206ENST00000533018 HOXA6P31267 233 aa18.98■□□□□ 0.63
PCF11-206ENST00000533018 ATICP31939 592 aa18.98■□□□□ 0.63
PCF11-206ENST00000533018 USP4Q13107 963 aa18.98■□□□□ 0.63
PCF11-206ENST00000533018 TDRD10Q5VZ19 366 aaKnown RBP18.98■□□□□ 0.63
PCF11-206ENST00000533018 NAIF1Q69YI7 327 aaPredicted RBP18.98■□□□□ 0.63
PCF11-206ENST00000533018 C12orf56Q8IXR9 622 aa18.98■□□□□ 0.63
PCF11-206ENST00000533018 CD101Q93033 1021 aa18.98■□□□□ 0.63
PCF11-206ENST00000533018 LINC00597Q9H2U6 94 aa18.98■□□□□ 0.63
PCF11-206ENST00000533018 RCOR1Q9UKL0 485 aa18.98■□□□□ 0.63
PCF11-206ENST00000533018 ARHGAP26Q9UNA1 814 aa18.98■□□□□ 0.63
PCF11-206ENST00000533018 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.98■□□□□ 0.63
PCF11-206ENST00000533018 MYH10P35580 1976 aa18.97■□□□□ 0.63
PCF11-206ENST00000533018 CLDN5O00501 218 aa18.97■□□□□ 0.63
PCF11-206ENST00000533018 FAM163BP0C2L3 166 aa18.97■□□□□ 0.63
PCF11-206ENST00000533018 PPP3CCP48454 512 aa18.97■□□□□ 0.63
PCF11-206ENST00000533018 ATXN1P54253 815 aaKnown RBP18.97■□□□□ 0.63
PCF11-206ENST00000533018 ZNF699Q32M78 642 aa18.97■□□□□ 0.63
PCF11-206ENST00000533018 EML3Q32P44 896 aa18.97■□□□□ 0.63
PCF11-206ENST00000533018 FAM160A2Q8N612 972 aaPredicted RBP18.97■□□□□ 0.63
PCF11-206ENST00000533018 B3GALNT2Q8NCR0 500 aa18.97■□□□□ 0.63
PCF11-206ENST00000533018 RPLP0P6Q8NHW5 317 aa18.97■□□□□ 0.63
PCF11-206ENST00000533018 PAGE5Q96GU1 130 aa18.97■□□□□ 0.63
PCF11-206ENST00000533018 C8orf48Q96LL4 319 aa18.97■□□□□ 0.63
PCF11-206ENST00000533018 MED10Q9BTT4 135 aa18.97■□□□□ 0.63
PCF11-206ENST00000533018 ELOVL4Q9GZR5 314 aa18.97■□□□□ 0.63
PCF11-206ENST00000533018 SEMA4GQ9NTN9 838 aa18.97■□□□□ 0.63
PCF11-206ENST00000533018 POLR3BQ9NW08 1133 aaPredicted RBP18.97■□□□□ 0.63
PCF11-206ENST00000533018 NME7Q9Y5B8 376 aa18.97■□□□□ 0.63
PCF11-206ENST00000533018 NCOR2Q9Y618 2525 aa18.97■□□□□ 0.63
PCF11-206ENST00000533018 A0A1B0GVL5 298 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 ZNF840PA6NDX5 716 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 LEFTY2O00292 366 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 LRP3O75074 770 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 RPP40O75818 363 aaKnown RBP18.96■□□□□ 0.63
PCF11-206ENST00000533018 NFATC1O95644 943 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 STAU1O95793 577 aaKnown RBP18.96■□□□□ 0.63
PCF11-206ENST00000533018 CACNA2D1P54289 1103 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 CDH8P55286 799 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 NOP14P78316 857 aaKnown RBP18.96■□□□□ 0.63
PCF11-206ENST00000533018 TAF10Q12962 218 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 STK4Q13043 487 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 KMT5BQ4FZB7 885 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 FBXO43Q4G163 708 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 ZNF667Q5HYK9 610 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 SCARA5Q6ZMJ2 495 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 SLITRK1Q96PX8 696 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 B3GNT5Q9BYG0 378 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 ZNF518BQ9C0D4 1074 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 GZF1Q9H116 711 aaPredicted RBP18.96■□□□□ 0.63
PCF11-206ENST00000533018 SMYD3Q9H7B4 428 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 SMPD4Q9NXE4 827 aa18.96■□□□□ 0.63
PCF11-206ENST00000533018 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.95■□□□□ 0.62
PCF11-206ENST00000533018 LRRIQ3A6PVS8 624 aaPredicted RBP18.95■□□□□ 0.62
PCF11-206ENST00000533018 AXIN1O15169 862 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 KLRC4O43908 158 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 PFKLP17858 780 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 RAP1GAPP47736 663 aa18.95■□□□□ 0.62
PCF11-206ENST00000533018 AP3M2P53677 418 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms