RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 NDFIP2Q9NV92 336 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 SUCLA2Q9P2R7 463 aaPredicted RBP1.9□□□□□ -2.1
KNL1-211ENST00000533001 PCDHB1Q9Y5F3 818 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 FURINP09958 794 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 CR2P20023 1033 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 YWHABP31946 246 aaKnown RBP1.9□□□□□ -2.11
KNL1-211ENST00000533001 EIF2DP41214 584 aaKnown RBP1.9□□□□□ -2.11
KNL1-211ENST00000533001 QARSP47897 775 aaKnown RBP1.9□□□□□ -2.11
KNL1-211ENST00000533001 RXRGP48443 463 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 KRT83P78385 493 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 SP4Q02446 784 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 DPYDQ12882 1025 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 DUSP4Q13115 394 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 PSMD5Q16401 504 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 PABPC1LQ4VXU2 614 aaKnown RBP1.9□□□□□ -2.11
KNL1-211ENST00000533001 ZNF648Q5T619 568 aaPredicted RBP1.9□□□□□ -2.11
KNL1-211ENST00000533001 GORABQ5T7V8 394 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 ZSCAN25Q6NSZ9 544 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 MON1AQ86VX9 555 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 CMTM8Q8IZV2 173 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 DEPDC1BQ8WUY9 529 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 PTCD2Q8WV60 388 aaKnown RBP1.9□□□□□ -2.11
KNL1-211ENST00000533001 SMOQ99835 787 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 EIF2AK1Q9BQI3 630 aaKnown RBP1.9□□□□□ -2.11
KNL1-211ENST00000533001 PCDHB12Q9Y5F1 795 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 STAG3L1P0CL83 205 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 PITX1P78337 314 aaPredicted RBP1.9□□□□□ -2.11
KNL1-211ENST00000533001 AGERQ15109 404 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 C5orf22Q49AR2 442 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 COLEC12Q5KU26 742 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 CYP4V2Q6ZWL3 525 aaPredicted RBP1.9□□□□□ -2.11
KNL1-211ENST00000533001 THNSL1Q8IYQ7 743 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 CCDC82Q8N4S0 544 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 CAMKK1Q8N5S9 505 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 PIGOQ8TEQ8 1089 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 TBC1D32Q96NH3 1257 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 ECT2Q9H8V3 914 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 ITM2CQ9NQX7 267 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 TJP2Q9UDY2 1190 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 KCNJ14Q9UNX9 436 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 CCL16O15467 120 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 GUCY2CP25092 1073 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 HLA-FP30511 346 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 PSMC5P62195 406 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 TMEM259Q4ZIN3 620 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 ZNF852Q6ZMS4 543 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 SPATA20Q8TB22 786 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 BAP1Q92560 729 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 DYDC2Q96IM9 177 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 FAM20AQ96MK3 541 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 PRICKLE1Q96MT3 831 aaPredicted RBP1.9□□□□□ -2.11
KNL1-211ENST00000533001 LARP6Q9BRS8 491 aaKnown RBP1.9□□□□□ -2.11
KNL1-211ENST00000533001 EBF3Q9H4W6 596 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 TMEM134Q9H6X4 195 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 SYNPO2LQ9H987 977 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 APOBEC3GQ9HC16 384 aaKnown RBP1.9□□□□□ -2.11
KNL1-211ENST00000533001 GKN1Q9NS71 199 aa1.9□□□□□ -2.11
KNL1-211ENST00000533001 ZBTB32Q9Y2Y4 487 aaPredicted RBP1.9□□□□□ -2.11
KNL1-211ENST00000533001 KINO60870 393 aaKnown RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 TULP3O75386 442 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 FOSP01100 380 aaPredicted RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 DDIT3P35638 169 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 CAMK2GQ13555 558 aaPredicted RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 RUNX3Q13761 415 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 DMC1Q14565 340 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 PON2Q15165 354 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 INF2Q27J81 1249 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 USP41Q3LFD5 358 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 SPIRE2Q8WWL2 714 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 NT5C3BQ969T7 300 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 ZNF274Q96GC6 653 aaPredicted RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 TMEM169Q96HH4 297 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 RANBP9Q96S59 729 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 MRPL9Q9BYD2 267 aaKnown RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 TASP1Q9H6P5 420 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 PKD2L1Q9P0L9 805 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 CYTH4Q9UIA0 394 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 SARDHQ9UL12 918 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 NR2E1Q9Y466 385 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 ALMS1Q8TCU4 4167 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 A0A1W2PQD8 194 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 TCRBV5S1A1TA0A578 114 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 IFIT3O14879 490 aaKnown RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 STAU1O95793 577 aaKnown RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 ALDH2P05091 517 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 ADH1AP07327 375 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 PRKCHP24723 683 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 POU5F1Q01860 360 aaKnown RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 ZNF252P-AS1Q0IIN9 211 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 CLCA4Q14CN2 919 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 FSCBQ5H9T9 825 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 NADSYN1Q6IA69 706 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 ZNF574Q6ZN55 896 aaPredicted RBP1.89□□□□□ -2.11
KNL1-211ENST00000533001 B3GNT8Q7Z7M8 397 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 PLA2G4DQ86XP0 818 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 ZNF295-AS1Q8N0V1 137 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 AADATQ8N5Z0 425 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 SLC39A13Q96H72 371 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 KCNK16Q96T55 309 aa1.89□□□□□ -2.11
KNL1-211ENST00000533001 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms