RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 VPS37AQ8NEZ2 397 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 SMARCD1Q96GM5 515 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 TMEM176AQ96HP8 235 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 A0A1B0GTH6 734 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 CA12O43570 354 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 DIAPH2O60879 1101 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 GNRH1P01148 92 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 YWHAQP27348 245 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 CTNNB1P35222 781 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 MED21Q13503 144 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 HASPINQ8TF76 798 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 OSBPL8Q9BZF1 889 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 SLC13A1Q9BZW2 595 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 GPRC5CQ9NQ84 441 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 KIF17Q9P2E2 1029 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 LNPEPQ9UIQ6 1025 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 ACKR2O00590 384 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 ARIH2O95376 493 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 TGM3Q08188 693 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 GRB10Q13322 594 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 E4F1Q66K89 784 aaPredicted RBP11.14□□□□□ -0.63
COLCA1-203ENST00000532918 BHMTQ93088 406 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 DIABLOQ9NR28 239 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.14□□□□□ -0.63
COLCA1-203ENST00000532918 SUPT3HB4E1H0 165 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 SOAT2O75908 522 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 STIP1P31948 543 aaKnown RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 ANXA11P50995 505 aaKnown RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 ZDHHC17Q8IUH5 632 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 RANBP17Q9H2T7 1088 aaKnown RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 GTF3C4Q9UKN8 822 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 IQGAP1P46940 1657 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 BCORL1Q5H9F3 1711 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 A0A1B0GW55 424 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 PHF20L1A8MW92 1017 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 IRF6O14896 467 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 CLASP2O75122 1294 aaKnown RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 PCDH8O95206 1070 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 CRTAMO95727 393 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 DUX4L2P0CJ85 424 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 DUX4L3P0CJ86 424 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 DUX4L4P0CJ87 422 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 DUX4L5P0CJ88 424 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 DUX4L6P0CJ89 424 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 DUX4L7P0CJ90 424 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 TM4SF1P30408 202 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 CYP24A1Q07973 514 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 NCAPHQ15003 741 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 TRMT10CQ7L0Y3 403 aaKnown RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 ADAM2Q99965 735 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 SENP2Q9HC62 589 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 A1CFQ9NQ94 594 aaKnown RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 DUX4Q9UBX2 424 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 TRMT6Q9UJA5 497 aaKnown RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 SYNDIG1LA6NDD5 238 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 PSTPIP1O43586 416 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 NCK2O43639 380 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 CCDC22O60826 627 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 MMEP08473 750 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 CAMK2GQ13555 558 aaPredicted RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 CCNJLQ8IV13 435 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 ZCCHC2Q9C0B9 1178 aaKnown RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 RIC8BQ9NVN3 520 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 STK39Q9UEW8 545 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 TSC22D4Q9Y3Q8 395 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 GTPBP10A4D1E9 387 aaKnown RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 GOLGA8TH3BQL2 631 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 MYO1CO00159 1063 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 CST8O60676 142 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 DAB1O75553 588 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 DDHD2O94830 711 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 SLC9A1P19634 815 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 MZF1P28698 734 aaPredicted RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 CCR1P32246 355 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 MRPS6P82932 125 aaKnown RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 NBPF20Q3BBV1 942 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 CELF3Q5SZQ8 465 aaKnown RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 DDX42Q86XP3 938 aaKnown RBP eCLIP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 SLAIN1Q8ND83 568 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 OR9Q1Q8NGQ5 310 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 SERPINB11Q96P15 392 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 COPS7BQ9H9Q2 264 aaPredicted RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 CNTNAP2Q9UHC6 1331 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 FAM47DPA6NHR8 397 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 NCAM2O15394 837 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 ZBTB48P10074 688 aaPredicted RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 ERVK-10P10266 1014 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 CASP8Q14790 479 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 C3orf67Q6ZVT6 689 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 PRUNE1Q86TP1 453 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 PHACTR4Q8IZ21 702 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 SYT17Q9BSW7 474 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 RUBCNLQ9H714 662 aa11.13□□□□□ -0.63
COLCA1-203ENST00000532918 DMAP1Q9NPF5 467 aaPredicted RBP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.13□□□□□ -0.63
COLCA1-203ENST00000532918 TMEM131LA2VDJ0 1609 aa11.12□□□□□ -0.63
COLCA1-203ENST00000532918 ATP5BP06576 529 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms