RNA–Protein interactions for RNA: ENST00000532884.1

PUF60-220, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-220ENST00000532884 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.35■□□□□ 0.05
PUF60-220ENST00000532884 PI15O43692 258 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 TADA3O75528 432 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 BEST1O76090 585 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 MAP3K7CLP57077 242 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 CETN1Q12798 172 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 KCNH2Q12809 1159 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 TAF10Q12962 218 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 TRIM59Q8IWR1 403 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 NUP93Q8N1F7 819 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 TMEM105Q8N8V8 129 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 SCAMP5Q8TAC9 235 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 TTC8Q8TAM2 541 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 DEPDC1BQ8WUY9 529 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 IRF7Q92985 503 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 ZFYVE19Q96K21 471 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 DNAI2Q9GZS0 605 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 DMAP1Q9NPF5 467 aaPredicted RBP15.34■□□□□ 0.05
PUF60-220ENST00000532884 EHD2Q9NZN4 543 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 TRPM5Q9NZQ8 1165 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 CCL26Q9Y258 94 aa15.34■□□□□ 0.05
PUF60-220ENST00000532884 TRAV19A0A0A6YYK7 116 aa15.33■□□□□ 0.04
PUF60-220ENST00000532884 C2orf78A6NCI8 922 aa15.33■□□□□ 0.04
PUF60-220ENST00000532884 AFPP02771 609 aaKnown RBP15.33■□□□□ 0.04
PUF60-220ENST00000532884 CKMP06732 381 aa15.33■□□□□ 0.04
PUF60-220ENST00000532884 DDX6P26196 483 aaKnown RBP eCLIP15.33■□□□□ 0.04
PUF60-220ENST00000532884 YWHAQP27348 245 aa15.33■□□□□ 0.04
PUF60-220ENST00000532884 CLCN5P51795 746 aa15.33■□□□□ 0.04
PUF60-220ENST00000532884 CUL2Q13617 745 aa15.33■□□□□ 0.04
PUF60-220ENST00000532884 MLF2Q15773 248 aaPredicted RBP15.33■□□□□ 0.04
PUF60-220ENST00000532884 HSP90AA4PQ58FG1 418 aa15.33■□□□□ 0.04
PUF60-220ENST00000532884 CWF19L1Q69YN2 538 aaKnown RBP15.33■□□□□ 0.04
PUF60-220ENST00000532884 CELF5Q8N6W0 485 aaKnown RBP15.33■□□□□ 0.04
PUF60-220ENST00000532884 ARL14EPQ8N8R7 260 aaPredicted RBP15.33■□□□□ 0.04
PUF60-220ENST00000532884 USP13Q92995 863 aaPredicted RBP15.33■□□□□ 0.04
PUF60-220ENST00000532884 SHDQ96IW2 340 aa15.33■□□□□ 0.04
PUF60-220ENST00000532884 CNOT6LQ96LI5 555 aaKnown RBP15.33■□□□□ 0.04
PUF60-220ENST00000532884 CEP295NLQ96MC4 621 aa15.33■□□□□ 0.04
PUF60-220ENST00000532884 SLC22A12Q96S37 553 aa15.33■□□□□ 0.04
PUF60-220ENST00000532884 SMOQ99835 787 aa15.33■□□□□ 0.04
PUF60-220ENST00000532884 FOXQ1Q9C009 403 aa15.33■□□□□ 0.04
PUF60-220ENST00000532884 TDP1Q9NUW8 608 aa15.33■□□□□ 0.04
PUF60-220ENST00000532884 CHORDC1Q9UHD1 332 aaPredicted RBP15.33■□□□□ 0.04
PUF60-220ENST00000532884 FAM200BP0CF97 657 aa15.32■□□□□ 0.04
PUF60-220ENST00000532884 HDCP19113 662 aa15.32■□□□□ 0.04
PUF60-220ENST00000532884 RAD23BP54727 409 aa15.32■□□□□ 0.04
PUF60-220ENST00000532884 UBXN2BQ14CS0 331 aa15.32■□□□□ 0.04
PUF60-220ENST00000532884 PPP1R26Q5T8A7 1209 aaPredicted RBP15.32■□□□□ 0.04
PUF60-220ENST00000532884 TPRG1Q6ZUI0 275 aa15.32■□□□□ 0.04
PUF60-220ENST00000532884 PPM1KQ8N3J5 372 aa15.32■□□□□ 0.04
PUF60-220ENST00000532884 BPIFB1Q8TDL5 484 aa15.32■□□□□ 0.04
PUF60-220ENST00000532884 FBXO32Q969P5 355 aa15.32■□□□□ 0.04
PUF60-220ENST00000532884 TMEM176AQ96HP8 235 aa15.32■□□□□ 0.04
PUF60-220ENST00000532884 NT5C1BQ96P26 610 aa15.32■□□□□ 0.04
PUF60-220ENST00000532884 SLITRK1Q96PX8 696 aa15.32■□□□□ 0.04
PUF60-220ENST00000532884 HNRNPABQ99729 332 aaKnown RBP15.32■□□□□ 0.04
PUF60-220ENST00000532884 TTLL2Q9BWV7 592 aa15.32■□□□□ 0.04
PUF60-220ENST00000532884 THG1LQ9NWX6 298 aaKnown RBP15.32■□□□□ 0.04
PUF60-220ENST00000532884 DACH1Q9UI36 760 aa15.32■□□□□ 0.04
PUF60-220ENST00000532884 SIT1Q9Y3P8 196 aa15.32■□□□□ 0.04
PUF60-220ENST00000532884 ZNF840PA6NDX5 716 aa15.31■□□□□ 0.04
PUF60-220ENST00000532884 RTN3O95197 1032 aaPredicted RBP15.31■□□□□ 0.04
PUF60-220ENST00000532884 DCNP07585 359 aaKnown RBP15.31■□□□□ 0.04
PUF60-220ENST00000532884 USP17L7P0C7H9 530 aa15.31■□□□□ 0.04
PUF60-220ENST00000532884 CD19P15391 556 aa15.31■□□□□ 0.04
PUF60-220ENST00000532884 AOC1P19801 751 aa15.31■□□□□ 0.04
PUF60-220ENST00000532884 MTIF2P46199 727 aaKnown RBP15.31■□□□□ 0.04
PUF60-220ENST00000532884 SLC5A3P53794 718 aa15.31■□□□□ 0.04
PUF60-220ENST00000532884 MARSP56192 900 aaKnown RBP15.31■□□□□ 0.04
PUF60-220ENST00000532884 RRAGAQ7L523 313 aa15.31■□□□□ 0.04
PUF60-220ENST00000532884 TTC39CQ8N584 583 aa15.31■□□□□ 0.04
PUF60-220ENST00000532884 SLC4A11Q8NBS3 891 aa15.31■□□□□ 0.04
PUF60-220ENST00000532884 EHBP1Q8NDI1 1231 aa15.31■□□□□ 0.04
PUF60-220ENST00000532884 ZMIZ2Q8NF64 920 aa15.31■□□□□ 0.04
PUF60-220ENST00000532884 CSGALNACT1Q8TDX6 532 aa15.31■□□□□ 0.04
PUF60-220ENST00000532884 FAXDC2Q96IV6 333 aa15.31■□□□□ 0.04
PUF60-220ENST00000532884 CRACR2AQ9BSW2 395 aa15.31■□□□□ 0.04
PUF60-220ENST00000532884 GKN1Q9NS71 199 aa15.31■□□□□ 0.04
PUF60-220ENST00000532884 ZMYM5Q9UJ78 669 aa15.31■□□□□ 0.04
PUF60-220ENST00000532884 MTF2Q9Y483 593 aaPredicted RBP15.31■□□□□ 0.04
PUF60-220ENST00000532884 WDFY4Q6ZS81 3184 aa15.3■□□□□ 0.04
PUF60-220ENST00000532884 FAM170BA6NMN3 283 aa15.3■□□□□ 0.04
PUF60-220ENST00000532884 TNFRSF10BO14763 440 aa15.3■□□□□ 0.04
PUF60-220ENST00000532884 CHADO15335 359 aa15.3■□□□□ 0.04
PUF60-220ENST00000532884 P4HA2O15460 535 aa15.3■□□□□ 0.04
PUF60-220ENST00000532884 TBXAS1P24557 533 aaPredicted RBP15.3■□□□□ 0.04
PUF60-220ENST00000532884 WEE1P30291 646 aa15.3■□□□□ 0.04
PUF60-220ENST00000532884 KPNA1P52294 538 aaPredicted RBP15.3■□□□□ 0.04
PUF60-220ENST00000532884 STARD6P59095 220 aa15.3■□□□□ 0.04
PUF60-220ENST00000532884 YWHAEP62258 255 aaKnown RBP15.3■□□□□ 0.04
PUF60-220ENST00000532884 PRKCQQ04759 706 aa15.3■□□□□ 0.04
PUF60-220ENST00000532884 TNK2Q07912 1038 aa15.3■□□□□ 0.04
PUF60-220ENST00000532884 FCHO2Q0JRZ9 810 aa15.3■□□□□ 0.04
PUF60-220ENST00000532884 ARHGAP29Q52LW3 1261 aa15.3■□□□□ 0.04
PUF60-220ENST00000532884 PHLDB3Q6NSJ2 640 aa15.3■□□□□ 0.04
PUF60-220ENST00000532884 CC2D1AQ6P1N0 951 aaPredicted RBP15.3■□□□□ 0.04
PUF60-220ENST00000532884 CLEC20AQ6ZU45 233 aa15.3■□□□□ 0.04
PUF60-220ENST00000532884 IRF2BP1Q8IU81 584 aa15.3■□□□□ 0.04
PUF60-220ENST00000532884 ARHGEF19Q8IW93 802 aa15.3■□□□□ 0.04
PUF60-220ENST00000532884 LMO3Q8TAP4 145 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms