RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 NCOA4Q13772 614 aa20.19■□□□□ 0.82
SSH3-209ENST00000532600 CCINQ13939 588 aa20.19■□□□□ 0.82
SSH3-209ENST00000532600 ZNF77Q15935 545 aa20.19■□□□□ 0.82
SSH3-209ENST00000532600 ITPRIPL2Q3MIP1 535 aa20.19■□□□□ 0.82
SSH3-209ENST00000532600 ZACNQ401N2 412 aa20.19■□□□□ 0.82
SSH3-209ENST00000532600 NAIF1Q69YI7 327 aaPredicted RBP20.19■□□□□ 0.82
SSH3-209ENST00000532600 PAQR9Q6ZVX9 377 aa20.19■□□□□ 0.82
SSH3-209ENST00000532600 ARL14EPQ8N8R7 260 aaPredicted RBP20.19■□□□□ 0.82
SSH3-209ENST00000532600 B3GALNT2Q8NCR0 500 aa20.19■□□□□ 0.82
SSH3-209ENST00000532600 ERCC4Q92889 916 aaPredicted RBP20.19■□□□□ 0.82
SSH3-209ENST00000532600 C8orf48Q96LL4 319 aa20.19■□□□□ 0.82
SSH3-209ENST00000532600 TTLL2Q9BWV7 592 aa20.19■□□□□ 0.82
SSH3-209ENST00000532600 KIF9Q9HAQ2 790 aa20.19■□□□□ 0.82
SSH3-209ENST00000532600 TRPC7Q9HCX4 862 aa20.19■□□□□ 0.82
SSH3-209ENST00000532600 THG1LQ9NWX6 298 aaKnown RBP20.19■□□□□ 0.82
SSH3-209ENST00000532600 MAPK8IP1Q9UQF2 711 aa20.19■□□□□ 0.82
SSH3-209ENST00000532600 A8MXQ7 604 aa20.18■□□□□ 0.82
SSH3-209ENST00000532600 AP3M2P53677 418 aa20.18■□□□□ 0.82
SSH3-209ENST00000532600 USP4Q13107 963 aa20.18■□□□□ 0.82
SSH3-209ENST00000532600 PNOCQ13519 176 aa20.18■□□□□ 0.82
SSH3-209ENST00000532600 RUNX3Q13761 415 aa20.18■□□□□ 0.82
SSH3-209ENST00000532600 ZNF699Q32M78 642 aa20.18■□□□□ 0.82
SSH3-209ENST00000532600 C1orf228Q6PIY5 440 aa20.18■□□□□ 0.82
SSH3-209ENST00000532600 SCARA5Q6ZMJ2 495 aa20.18■□□□□ 0.82
SSH3-209ENST00000532600 DENND5BQ6ZUT9 1274 aa20.18■□□□□ 0.82
SSH3-209ENST00000532600 SV2AQ7L0J3 742 aa20.18■□□□□ 0.82
SSH3-209ENST00000532600 DCLK2Q8N568 766 aa20.18■□□□□ 0.82
SSH3-209ENST00000532600 TMC2Q8TDI7 906 aa20.18■□□□□ 0.82
SSH3-209ENST00000532600 TIGD1Q96MW7 591 aa20.18■□□□□ 0.82
SSH3-209ENST00000532600 IER2Q9BTL4 223 aa20.18■□□□□ 0.82
SSH3-209ENST00000532600 TRAV19A0A0A6YYK7 116 aa20.17■□□□□ 0.82
SSH3-209ENST00000532600 KINO60870 393 aaKnown RBP20.17■□□□□ 0.82
SSH3-209ENST00000532600 AKAP3O75969 853 aa20.17■□□□□ 0.82
SSH3-209ENST00000532600 NOP14P78316 857 aaKnown RBP20.17■□□□□ 0.82
SSH3-209ENST00000532600 DMWDQ09019 674 aa20.17■□□□□ 0.82
SSH3-209ENST00000532600 MTF1Q14872 753 aa20.17■□□□□ 0.82
SSH3-209ENST00000532600 NFIL3Q16649 462 aa20.17■□□□□ 0.82
SSH3-209ENST00000532600 ZCWPW2Q504Y3 356 aa20.17■□□□□ 0.82
SSH3-209ENST00000532600 CEP135Q66GS9 1140 aa20.17■□□□□ 0.82
SSH3-209ENST00000532600 PKN3Q6P5Z2 889 aa20.17■□□□□ 0.82
SSH3-209ENST00000532600 SPEM1Q8N4L4 309 aa20.17■□□□□ 0.82
SSH3-209ENST00000532600 GPT2Q8TD30 523 aa20.17■□□□□ 0.82
SSH3-209ENST00000532600 CEP295NLQ96MC4 621 aa20.17■□□□□ 0.82
SSH3-209ENST00000532600 FBRSL1Q9HCM7 1045 aaKnown RBP20.17■□□□□ 0.82
SSH3-209ENST00000532600 HMGXB4Q9UGU5 601 aa20.17■□□□□ 0.82
SSH3-209ENST00000532600 ZNF840PA6NDX5 716 aa20.16■□□□□ 0.82
SSH3-209ENST00000532600 K7ESF4 209 aa20.16■□□□□ 0.82
SSH3-209ENST00000532600 TRIM66O15016 1216 aa20.16■□□□□ 0.82
SSH3-209ENST00000532600 CALUO43852 315 aaPredicted RBP20.16■□□□□ 0.82
SSH3-209ENST00000532600 USP17L7P0C7H9 530 aa20.16■□□□□ 0.82
SSH3-209ENST00000532600 CCR3P51677 355 aa20.16■□□□□ 0.82
SSH3-209ENST00000532600 LRRC32Q14392 662 aa20.16■□□□□ 0.82
SSH3-209ENST00000532600 KCNB1Q14721 858 aa20.16■□□□□ 0.82
SSH3-209ENST00000532600 ZNF667Q5HYK9 610 aa20.16■□□□□ 0.82
SSH3-209ENST00000532600 SPOPLQ6IQ16 392 aa20.16■□□□□ 0.82
SSH3-209ENST00000532600 FSTL4Q6MZW2 842 aa20.16■□□□□ 0.82
SSH3-209ENST00000532600 ATRIPQ8WXE1 791 aa20.16■□□□□ 0.82
SSH3-209ENST00000532600 RNF38Q9H0F5 515 aa20.16■□□□□ 0.82
SSH3-209ENST00000532600 EPC1Q9H2F5 836 aa20.16■□□□□ 0.82
SSH3-209ENST00000532600 WNT6Q9Y6F9 365 aa20.16■□□□□ 0.82
SSH3-209ENST00000532600 DMXL1Q9Y485 3027 aa20.16■□□□□ 0.82
SSH3-209ENST00000532600 CKMP06732 381 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 TRIM49P0CI25 452 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 TRIM49CP0CI26 452 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 TCF3P15923 654 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 NR2F2P24468 414 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 ANXA13P27216 316 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 ASPAP45381 313 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 MCCD1P59942 119 aaPredicted RBP20.15■□□□□ 0.82
SSH3-209ENST00000532600 PPP3CAQ08209 521 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 ORC1Q13415 861 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 TMEM196Q5HYL7 178 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 DGKKQ5KSL6 1271 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 SMYD4Q8IYR2 804 aaPredicted RBP20.15■□□□□ 0.82
SSH3-209ENST00000532600 GUF1Q8N442 669 aaKnown RBP20.15■□□□□ 0.82
SSH3-209ENST00000532600 SH3RF2Q8TEC5 729 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 OSCP1Q8WVF1 389 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 KCNK16Q96T55 309 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 ELOVL4Q9GZR5 314 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 LINC00597Q9H2U6 94 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 APOBEC3GQ9HC16 384 aaKnown RBP20.15■□□□□ 0.82
SSH3-209ENST00000532600 ARHGAP26Q9UNA1 814 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 DCHS1Q96JQ0 3298 aa20.15■□□□□ 0.82
SSH3-209ENST00000532600 TRDMT1O14717 391 aaKnown RBP20.14■□□□□ 0.81
SSH3-209ENST00000532600 IKBKBO14920 756 aa20.14■□□□□ 0.81
SSH3-209ENST00000532600 MAPK13O15264 365 aa20.14■□□□□ 0.81
SSH3-209ENST00000532600 PAPSS2O95340 614 aaPredicted RBP20.14■□□□□ 0.81
SSH3-209ENST00000532600 OLFM2O95897 454 aa20.14■□□□□ 0.81
SSH3-209ENST00000532600 ASS1P00966 412 aaKnown RBP20.14■□□□□ 0.81
SSH3-209ENST00000532600 HLA-DRAP01903 254 aa20.14■□□□□ 0.81
SSH3-209ENST00000532600 HDCP19113 662 aa20.14■□□□□ 0.81
SSH3-209ENST00000532600 CXCL12P48061 93 aa20.14■□□□□ 0.81
SSH3-209ENST00000532600 VAMP7P51809 220 aa20.14■□□□□ 0.81
SSH3-209ENST00000532600 TAF10Q12962 218 aa20.14■□□□□ 0.81
SSH3-209ENST00000532600 PDGFRLQ15198 375 aa20.14■□□□□ 0.81
SSH3-209ENST00000532600 SGSM1Q2NKQ1 1148 aa20.14■□□□□ 0.81
SSH3-209ENST00000532600 EML3Q32P44 896 aa20.14■□□□□ 0.81
SSH3-209ENST00000532600 ACOT1Q86TX2 421 aa20.14■□□□□ 0.81
SSH3-209ENST00000532600 FAM35AQ86V20 835 aa20.14■□□□□ 0.81
SSH3-209ENST00000532600 ELOA2Q8IYF1 753 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms