RNA–Protein interactions for RNA: ENST00000532541.5

LINC00958-206, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 1,124 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-206ENST00000532541 GREB1Q4ZG55 1949 aa8.52□□□□□ -1.04
LINC00958-206ENST00000532541 LEFTY2O00292 366 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 CLDN5O00501 218 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 FOXD2O60548 495 aaPredicted RBP8.52□□□□□ -1.05
LINC00958-206ENST00000532541 RHOBTB1O94844 696 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 CAVIN2O95810 425 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 IRF1P10914 325 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 MBL2P11226 248 aaPredicted RBP8.52□□□□□ -1.05
LINC00958-206ENST00000532541 CASP1P29466 404 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 HOXA6P31267 233 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 TIE1P35590 1138 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 GNL1P36915 607 aaPredicted RBP8.52□□□□□ -1.05
LINC00958-206ENST00000532541 POU5F1Q01860 360 aaKnown RBP8.52□□□□□ -1.05
LINC00958-206ENST00000532541 BIRC3Q13489 604 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 CUL4AQ13619 759 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 SURF1Q15526 300 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 UAP1L1Q3KQV9 507 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 PLK5Q496M5 336 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 CFAP221Q4G0U5 840 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 FBXO43Q4G163 708 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 PSAPL1Q6NUJ1 521 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 SCARA5Q6ZMJ2 495 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 DENND5BQ6ZUT9 1274 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 SYT13Q7L8C5 426 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 TRAPPC11Q7Z392 1133 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 FILIP1Q7Z7B0 1213 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 SFTPA1Q8IWL2 248 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 PGBD3Q8N328 593 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 CAMKK1Q8N5S9 505 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 KBTBD7Q8WVZ9 684 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 DDX1Q92499 740 aaKnown RBP8.52□□□□□ -1.05
LINC00958-206ENST00000532541 TRMT2BQ96GJ1 504 aaKnown RBP8.52□□□□□ -1.05
LINC00958-206ENST00000532541 PCED1BQ96HM7 432 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 FUBP3Q96I24 572 aaKnown RBP eCLIP8.52□□□□□ -1.05
LINC00958-206ENST00000532541 MYRFLQ96LU7 910 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 PKMYT1Q99640 499 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 ZNF518BQ9C0D4 1074 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 NACA2Q9H009 215 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 BLZF1Q9H2G9 400 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 DPEP3Q9H4B8 488 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 VPS45Q9NRW7 570 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 GCNT4Q9P109 453 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 CFAP97Q9P2B7 532 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 MTMR6Q9Y217 621 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 CPQQ9Y646 472 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 ANAPC1Q9H1A4 1944 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 CACNA1BQ00975 2339 aa8.52□□□□□ -1.05
LINC00958-206ENST00000532541 MYO16Q9Y6X6 1858 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 HELZP42694 1942 aaKnown RBP8.51□□□□□ -1.05
LINC00958-206ENST00000532541 C4orf47A7E2U8 309 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 A8MXQ7 604 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 GABRDO14764 452 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 TRIM66O15016 1216 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 MAP3K13O43283 966 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 KLF8O95600 359 aaPredicted RBP8.51□□□□□ -1.05
LINC00958-206ENST00000532541 BCKDHBP21953 392 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 WARSP23381 471 aaKnown RBP8.51□□□□□ -1.05
LINC00958-206ENST00000532541 MAGEA11P43364 429 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 AFMP43652 599 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 RAP1GAPP47736 663 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 SLC6A11P48066 632 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 PDE6CP51160 858 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 NOVA1P51513 510 aaKnown RBP8.51□□□□□ -1.05
LINC00958-206ENST00000532541 FOXC1Q12948 553 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 TAF10Q12962 218 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 SLC39A14Q15043 492 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 MAPRE1Q15691 268 aaKnown RBP8.51□□□□□ -1.05
LINC00958-206ENST00000532541 SNRNP35Q16560 246 aaKnown RBP8.51□□□□□ -1.05
LINC00958-206ENST00000532541 WDR72Q3MJ13 1102 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 USP39Q53GS9 565 aaKnown RBP8.51□□□□□ -1.05
LINC00958-206ENST00000532541 FAM26FQ5R3K3 315 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 TDRD10Q5VZ19 366 aaKnown RBP8.51□□□□□ -1.05
LINC00958-206ENST00000532541 FAM171BQ6P995 826 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 DPH6Q7L8W6 267 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 CYP2U1Q7Z449 544 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 WDR49Q8IV35 697 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 ALLCQ8N6M5 410 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 NAT16Q8N8M0 369 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 TXNDC5Q8NBS9 432 aaKnown RBP8.51□□□□□ -1.05
LINC00958-206ENST00000532541 CXorf38Q8TB03 319 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 MYCBPAPQ8TBZ2 947 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 RLN3Q8WXF3 142 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 PIGKQ92643 395 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 JAKMIP2Q96AA8 810 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 LOXL4Q96JB6 756 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 SLITRK1Q96PX8 696 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 LRRC27Q9C0I9 530 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 DUSP15Q9H1R2 295 aaPredicted RBP8.51□□□□□ -1.05
LINC00958-206ENST00000532541 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.51□□□□□ -1.056e-7■■■■■ 62.1
LINC00958-206ENST00000532541 ANGPTL2Q9UKU9 493 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 ARHGAP26Q9UNA1 814 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 NME7Q9Y5B8 376 aa8.51□□□□□ -1.05
LINC00958-206ENST00000532541 TPRP12270 2363 aaKnown RBP8.51□□□□□ -1.05
LINC00958-206ENST00000532541 ATXN2Q99700 1313 aaKnown RBP8.51□□□□□ -1.05
LINC00958-206ENST00000532541 THADAQ6YHU6 1953 aa8.5□□□□□ -1.05
LINC00958-206ENST00000532541 CCDC163A0A0D9SF12 145 aa8.5□□□□□ -1.05
LINC00958-206ENST00000532541 FRMD3A2A2Y4 597 aa8.5□□□□□ -1.05
LINC00958-206ENST00000532541 ZNF840PA6NDX5 716 aa8.5□□□□□ -1.05
LINC00958-206ENST00000532541 PATE3B3GLJ2 98 aa8.5□□□□□ -1.05
LINC00958-206ENST00000532541 KIAA0391O15091 583 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms