RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 SMG8Q8ND04 991 aaKnown RBP12.9□□□□□ -0.34
CHD7-211ENST00000532149 KCTD13Q8WZ19 329 aa12.9□□□□□ -0.34
CHD7-211ENST00000532149 HNRNPABQ99729 332 aaKnown RBP12.9□□□□□ -0.34
CHD7-211ENST00000532149 MAK16Q9BXY0 300 aaKnown RBP12.9□□□□□ -0.34
CHD7-211ENST00000532149 FRMD8Q9BZ67 464 aaPredicted RBP12.9□□□□□ -0.34
CHD7-211ENST00000532149 DDX20Q9UHI6 824 aaKnown RBP12.9□□□□□ -0.34
CHD7-211ENST00000532149 USTQ9Y2C2 406 aa12.9□□□□□ -0.34
CHD7-211ENST00000532149 hCG_1818297A0A087WSY0 165 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 A0A0U1RQF3 1178 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 ESYT3A0FGR9 886 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 CFAP69A5D8W1 941 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 C2CD4BA6NLJ0 364 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 AGPSO00116 658 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 ARHGAP33O14559 1287 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 GABRDO14764 452 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 XPO1O14980 1071 aaKnown RBP12.89□□□□□ -0.35
CHD7-211ENST00000532149 MDM4O15151 490 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 INPPL1O15357 1258 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 PRPSAP2O60256 369 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 LRCH4O75427 683 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 FBXO21O94952 628 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 ATF2P15336 505 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 PDGFRAP16234 1089 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 FGFR4P22455 802 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 ATP5DP30049 168 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 SDC4P31431 198 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 HSD17B3P37058 310 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 CDKN2BP42772 138 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 RAP1GAPP47736 663 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 PMS2P54278 862 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 PLCB3Q01970 1234 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 DHX9Q08211 1270 aaKnown RBP12.89□□□□□ -0.35
CHD7-211ENST00000532149 KCNA10Q16322 511 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 PTGISQ16647 500 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 PTPROQ16827 1216 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 GOLGA7BQ2TAP0 167 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 C6orf118Q5T5N4 469 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 GDF6Q6KF10 455 aaPredicted RBP12.89□□□□□ -0.35
CHD7-211ENST00000532149 CXCL17Q6UXB2 119 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 SLC26A9Q7LBE3 791 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 ADGRF2Q8IZF7 708 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 TMEM40Q8WWA1 233 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 HAUS1Q96CS2 278 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 FAM84AQ96KN4 292 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 GLT1D1Q96MS3 346 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 ZIM3Q96PE6 472 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 TWNKQ96RR1 684 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 CCDC77Q9BR77 488 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 FTHL17Q9BXU8 183 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 TXLNGYQ9BZA5 131 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 ERVK-5Q9HDB9 667 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 VPS18Q9P253 973 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 RCOR3Q9P2K3 495 aaPredicted RBP12.89□□□□□ -0.35
CHD7-211ENST00000532149 KANSL3Q9P2N6 904 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 USP18Q9UMW8 372 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 NOD1Q9Y239 953 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 PTCH2Q9Y6C5 1203 aa12.89□□□□□ -0.35
CHD7-211ENST00000532149 F8VP50 259 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 GOLGA8SH3BPF8 625 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 APOC4-APOC2K7ER74 178 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 LIASO43766 372 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 ENDOD1O94919 500 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 APOC2P02655 101 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 KDELR1P24390 212 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 GUCY2FP51841 1108 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 PLTPP55058 493 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 VCPP55072 806 aaKnown RBP12.88□□□□□ -0.35
CHD7-211ENST00000532149 TAS2R40P59535 323 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 SLC25A11Q02978 314 aaKnown RBP12.88□□□□□ -0.35
CHD7-211ENST00000532149 KRT17Q04695 432 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 PRKCZQ05513 592 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 ADCY2Q08462 1091 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 PPP1R26Q5T8A7 1209 aaPredicted RBP12.88□□□□□ -0.35
CHD7-211ENST00000532149 DMRTA1Q5VZB9 504 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 DENND2CQ68D51 928 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 OR6B2Q6IFH4 312 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 PAXIP1Q6ZW49 1069 aaPredicted RBP12.88□□□□□ -0.35
CHD7-211ENST00000532149 STRADAQ7RTN6 431 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 GSTA5Q7RTV2 222 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 METTL23Q86XA0 190 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 KCTD6Q8NC69 237 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 ELMO3Q96BJ8 720 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 CAPNS2Q96L46 248 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 TTC25Q96NG3 672 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 FERMT1Q9BQL6 677 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 DUSP16Q9BY84 665 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 ST7Q9NRC1 585 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 METTL5Q9NRN9 209 aaKnown RBP12.88□□□□□ -0.35
CHD7-211ENST00000532149 TUBGCP4Q9UGJ1 667 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 ASIC3Q9UHC3 531 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 CHORDC1Q9UHD1 332 aaPredicted RBP12.88□□□□□ -0.35
CHD7-211ENST00000532149 CDH9Q9ULB4 789 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 NR2E1Q9Y466 385 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 TRIP12Q14669 1992 aaPredicted RBP12.88□□□□□ -0.35
CHD7-211ENST00000532149 TRIP11Q15643 1979 aa12.88□□□□□ -0.35
CHD7-211ENST00000532149 LRRD1A4D1F6 860 aa12.87□□□□□ -0.35
CHD7-211ENST00000532149 H3BQF6 201 aa12.87□□□□□ -0.35
CHD7-211ENST00000532149 CYB561D2O14569 222 aa12.87□□□□□ -0.35
CHD7-211ENST00000532149 POLR3GO15318 223 aaPredicted RBP12.87□□□□□ -0.35
CHD7-211ENST00000532149 EIF3HO15372 352 aaKnown RBP eCLIP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms