RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 PTPRDP23468 1912 aa23.58■■□□□ 1.37
LRRK1-208ENST00000532029 ZNF197O14709 1029 aa23.57■■□□□ 1.36
LRRK1-208ENST00000532029 BEST1O76090 585 aa23.57■■□□□ 1.36
LRRK1-208ENST00000532029 FGF19O95750 216 aa23.57■■□□□ 1.36
LRRK1-208ENST00000532029 PBX1P40424 430 aa23.57■■□□□ 1.36
LRRK1-208ENST00000532029 BCAT1P54687 386 aa23.57■■□□□ 1.36
LRRK1-208ENST00000532029 JAM2P57087 298 aa23.57■■□□□ 1.36
LRRK1-208ENST00000532029 MTMR3Q13615 1198 aa23.57■■□□□ 1.36
LRRK1-208ENST00000532029 SARM1Q6SZW1 724 aa23.57■■□□□ 1.36
LRRK1-208ENST00000532029 ZNF606Q8WXB4 792 aa23.57■■□□□ 1.36
LRRK1-208ENST00000532029 ACP6Q9NPH0 428 aa23.57■■□□□ 1.36
LRRK1-208ENST00000532029 AVENQ9NQS1 362 aaPredicted RBP23.57■■□□□ 1.36
LRRK1-208ENST00000532029 UXTQ9UBK9 157 aaPredicted RBP23.57■■□□□ 1.36
LRRK1-208ENST00000532029 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.57■■□□□ 1.36
LRRK1-208ENST00000532029 MRPS23Q9Y3D9 190 aaKnown RBP23.57■■□□□ 1.36
LRRK1-208ENST00000532029 M0QYV0 167 aa23.56■■□□□ 1.36
LRRK1-208ENST00000532029 MICAL2O94851 1124 aa23.56■■□□□ 1.36
LRRK1-208ENST00000532029 CLCN1P35523 988 aa23.56■■□□□ 1.36
LRRK1-208ENST00000532029 SOX5P35711 763 aa23.56■■□□□ 1.36
LRRK1-208ENST00000532029 EPHA5P54756 1037 aa23.56■■□□□ 1.36
LRRK1-208ENST00000532029 BST2Q10589 180 aaKnown RBP23.56■■□□□ 1.36
LRRK1-208ENST00000532029 TTC30AQ86WT1 665 aa23.56■■□□□ 1.36
LRRK1-208ENST00000532029 TMC8Q8IU68 726 aa23.56■■□□□ 1.36
LRRK1-208ENST00000532029 NUP93Q8N1F7 819 aa23.56■■□□□ 1.36
LRRK1-208ENST00000532029 ZMIZ2Q8NF64 920 aa23.56■■□□□ 1.36
LRRK1-208ENST00000532029 UBA3Q8TBC4 463 aa23.56■■□□□ 1.36
LRRK1-208ENST00000532029 GCNAQ96QF7 691 aa23.56■■□□□ 1.36
LRRK1-208ENST00000532029 ZSWIM1Q9BR11 485 aa23.56■■□□□ 1.36
LRRK1-208ENST00000532029 PHF7Q9BWX1 381 aaPredicted RBP23.56■■□□□ 1.36
LRRK1-208ENST00000532029 TRIM5Q9C035 493 aa23.56■■□□□ 1.36
LRRK1-208ENST00000532029 PNPLA8Q9NP80 782 aa23.56■■□□□ 1.36
LRRK1-208ENST00000532029 REV3LO60673 3130 aa23.56■■□□□ 1.36
LRRK1-208ENST00000532029 C2orf16Q68DN1 1984 aa23.55■■□□□ 1.36
LRRK1-208ENST00000532029 GFPT2O94808 682 aa23.55■■□□□ 1.36
LRRK1-208ENST00000532029 RTN3O95197 1032 aaPredicted RBP23.55■■□□□ 1.36
LRRK1-208ENST00000532029 SETSIPP0DME0 302 aa23.55■■□□□ 1.36
LRRK1-208ENST00000532029 HMGA1P17096 107 aaKnown RBP23.55■■□□□ 1.36
LRRK1-208ENST00000532029 IFRD2Q12894 506 aaPredicted RBP23.55■■□□□ 1.36
LRRK1-208ENST00000532029 FIGNQ5HY92 759 aa23.55■■□□□ 1.36
LRRK1-208ENST00000532029 GET4Q7L5D6 327 aaPredicted RBP23.55■■□□□ 1.36
LRRK1-208ENST00000532029 SLC47A2Q86VL8 602 aa23.55■■□□□ 1.36
LRRK1-208ENST00000532029 FMNL3Q8IVF7 1028 aa23.55■■□□□ 1.36
LRRK1-208ENST00000532029 IQCDQ96DY2 449 aa23.55■■□□□ 1.36
LRRK1-208ENST00000532029 TRMT2BQ96GJ1 504 aaKnown RBP23.55■■□□□ 1.36
LRRK1-208ENST00000532029 LRRC3Q9BY71 257 aa23.55■■□□□ 1.36
LRRK1-208ENST00000532029 EDEM3Q9BZQ6 932 aa23.55■■□□□ 1.36
LRRK1-208ENST00000532029 ZNF334Q9HCZ1 680 aaPredicted RBP23.55■■□□□ 1.36
LRRK1-208ENST00000532029 GABRR2P28476 465 aa23.54■■□□□ 1.36
LRRK1-208ENST00000532029 CDC25CP30307 473 aa23.54■■□□□ 1.36
LRRK1-208ENST00000532029 SSTR3P32745 418 aaPredicted RBP23.54■■□□□ 1.36
LRRK1-208ENST00000532029 PDE6CP51160 858 aa23.54■■□□□ 1.36
LRRK1-208ENST00000532029 SLC5A3P53794 718 aa23.54■■□□□ 1.36
LRRK1-208ENST00000532029 PDE4CQ08493 712 aa23.54■■□□□ 1.36
LRRK1-208ENST00000532029 ITFG1Q8TB96 612 aa23.54■■□□□ 1.36
LRRK1-208ENST00000532029 MYRFLQ96LU7 910 aa23.54■■□□□ 1.36
LRRK1-208ENST00000532029 UBXN6Q9BZV1 441 aa23.54■■□□□ 1.36
LRRK1-208ENST00000532029 COMMD8Q9NX08 183 aa23.54■■□□□ 1.36
LRRK1-208ENST00000532029 MYO6Q9UM54 1294 aa23.54■■□□□ 1.36
LRRK1-208ENST00000532029 XPO1O14980 1071 aaKnown RBP23.53■■□□□ 1.36
LRRK1-208ENST00000532029 CCDC172P0C7W6 258 aa23.53■■□□□ 1.36
LRRK1-208ENST00000532029 CYP11B1P15538 503 aa23.53■■□□□ 1.36
LRRK1-208ENST00000532029 YWHAQP27348 245 aa23.53■■□□□ 1.36
LRRK1-208ENST00000532029 GBP2P32456 591 aaPredicted RBP23.53■■□□□ 1.36
LRRK1-208ENST00000532029 KRT9P35527 623 aa23.53■■□□□ 1.36
LRRK1-208ENST00000532029 MEA1Q16626 185 aa23.53■■□□□ 1.36
LRRK1-208ENST00000532029 SLC5A9Q2M3M2 681 aa23.53■■□□□ 1.36
LRRK1-208ENST00000532029 PRSS36Q5K4E3 855 aa23.53■■□□□ 1.36
LRRK1-208ENST00000532029 OTOP3Q7RTS5 596 aa23.53■■□□□ 1.36
LRRK1-208ENST00000532029 SECISBP2LQ93073 1101 aaKnown RBP23.53■■□□□ 1.36
LRRK1-208ENST00000532029 ACSF2Q96CM8 615 aaPredicted RBP23.53■■□□□ 1.36
LRRK1-208ENST00000532029 TTLL2Q9BWV7 592 aa23.53■■□□□ 1.36
LRRK1-208ENST00000532029 PDCL3Q9H2J4 239 aa23.53■■□□□ 1.36
LRRK1-208ENST00000532029 ATXN3LQ9H3M9 355 aa23.53■■□□□ 1.36
LRRK1-208ENST00000532029 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.53■■□□□ 1.36
LRRK1-208ENST00000532029 NR2E1Q9Y466 385 aa23.53■■□□□ 1.36
LRRK1-208ENST00000532029 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.53■■□□□ 1.36
LRRK1-208ENST00000532029 ITIH6Q6UXX5 1313 aa23.53■■□□□ 1.36
LRRK1-208ENST00000532029 A0A1W2PRU2 124 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 TNFRSF10BO14763 440 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 BMP1P13497 986 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 CCR2P41597 374 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 USP46P62068 366 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 PKDCCQ504Y2 493 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 ARHGAP15Q53QZ3 475 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 PIGZQ86VD9 579 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 GPIHBP1Q8IV16 184 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 ZNF397Q8NF99 534 aaPredicted RBP23.52■■□□□ 1.36
LRRK1-208ENST00000532029 SCAMP5Q8TAC9 235 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 SHKBP1Q8TBC3 707 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 ING5Q8WYH8 240 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 BAP1Q92560 729 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 TCEAL4Q96EI5 215 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 RPGRIP1Q96KN7 1286 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 SLITRK1Q96PX8 696 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 TTYH3Q9C0H2 523 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 FBXO44Q9H4M3 255 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 IL21Q9HBE4 155 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 PRKAG3Q9UGI9 489 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 USTQ9Y2C2 406 aa23.52■■□□□ 1.36
LRRK1-208ENST00000532029 HHLA1C9JL84 531 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms