RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 SYNPOQ8N3V7 929 aa19.11■□□□□ 0.65
PTPN11-204ENST00000531326 SEMA4GQ9NTN9 838 aa19.11■□□□□ 0.65
PTPN11-204ENST00000531326 AGAP1Q9UPQ3 857 aa19.11■□□□□ 0.65
PTPN11-204ENST00000531326 FRMD4BQ9Y2L6 1034 aa19.11■□□□□ 0.65
PTPN11-204ENST00000531326 ATG2BQ96BY7 2078 aa19.1■□□□□ 0.65
PTPN11-204ENST00000531326 TADA3O75528 432 aa19.1■□□□□ 0.65
PTPN11-204ENST00000531326 PSMC2P35998 433 aaKnown RBP19.1■□□□□ 0.65
PTPN11-204ENST00000531326 AVPR1AP37288 418 aa19.1■□□□□ 0.65
PTPN11-204ENST00000531326 PNPLA4P41247 253 aa19.1■□□□□ 0.65
PTPN11-204ENST00000531326 TSPY1Q01534 308 aa19.1■□□□□ 0.65
PTPN11-204ENST00000531326 RUNX3Q13761 415 aa19.1■□□□□ 0.65
PTPN11-204ENST00000531326 CCDC142Q17RM4 750 aa19.1■□□□□ 0.65
PTPN11-204ENST00000531326 TMEM196Q5HYL7 178 aa19.1■□□□□ 0.65
PTPN11-204ENST00000531326 LMBRD2Q68DH5 695 aaPredicted RBP19.1■□□□□ 0.65
PTPN11-204ENST00000531326 FSTL4Q6MZW2 842 aa19.1■□□□□ 0.65
PTPN11-204ENST00000531326 SASS6Q6UVJ0 657 aa19.1■□□□□ 0.65
PTPN11-204ENST00000531326 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.1■□□□□ 0.65
PTPN11-204ENST00000531326 WDR5BQ86VZ2 330 aa19.1■□□□□ 0.65
PTPN11-204ENST00000531326 CCDC127Q96BQ5 260 aa19.1■□□□□ 0.65
PTPN11-204ENST00000531326 PKMYT1Q99640 499 aa19.1■□□□□ 0.65
PTPN11-204ENST00000531326 EBF3Q9H4W6 596 aa19.1■□□□□ 0.65
PTPN11-204ENST00000531326 TDP1Q9NUW8 608 aa19.1■□□□□ 0.65
PTPN11-204ENST00000531326 ZMYM5Q9UJ78 669 aa19.1■□□□□ 0.65
PTPN11-204ENST00000531326 MAGED2Q9UNF1 606 aaPredicted RBP19.1■□□□□ 0.65
PTPN11-204ENST00000531326 CSH1P0DML2 217 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 CSH2P0DML3 217 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 DLATP10515 647 aaKnown RBP19.09■□□□□ 0.65
PTPN11-204ENST00000531326 ARSAP15289 507 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 ACAT1P24752 427 aaKnown RBP19.09■□□□□ 0.65
PTPN11-204ENST00000531326 CYP2F1P24903 491 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 DDX6P26196 483 aaKnown RBP eCLIP19.09■□□□□ 0.65
PTPN11-204ENST00000531326 ERCC5P28715 1186 aaPredicted RBP19.09■□□□□ 0.65
PTPN11-204ENST00000531326 MCCD1P59942 119 aaPredicted RBP19.09■□□□□ 0.65
PTPN11-204ENST00000531326 CSRP2Q16527 193 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 NFE2Q16621 373 aaPredicted RBP19.09■□□□□ 0.65
PTPN11-204ENST00000531326 STX1AQ16623 288 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 DDR2Q16832 855 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 PRR23CQ6ZRP0 262 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 OSTM1Q86WC4 334 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 WDR49Q8IV35 697 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 FAM186BQ8IYM0 893 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 FAM160A2Q8N612 972 aaPredicted RBP19.09■□□□□ 0.65
PTPN11-204ENST00000531326 OR5B17Q8NGF7 314 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 PARD3BQ8TEW8 1205 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 CGRRF1Q99675 332 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 ACBD6Q9BR61 282 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 INTS13Q9NVM9 706 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 ANO10Q9NW15 660 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 DDX43Q9NXZ2 648 aaKnown RBP19.09■□□□□ 0.65
PTPN11-204ENST00000531326 DACH1Q9UI36 760 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 SIX4Q9UIU6 781 aa19.09■□□□□ 0.65
PTPN11-204ENST00000531326 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.08■□□□□ 0.64
PTPN11-204ENST00000531326 LRRIQ3A6PVS8 624 aaPredicted RBP19.08■□□□□ 0.64
PTPN11-204ENST00000531326 TULP1O00294 542 aaPredicted RBP19.08■□□□□ 0.64
PTPN11-204ENST00000531326 SLC30A4O14863 429 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 SLC16A3O15427 465 aaKnown RBP19.08■□□□□ 0.64
PTPN11-204ENST00000531326 HCRTO43612 131 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 GDF9O60383 454 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 PXNP49023 591 aaPredicted RBP19.08■□□□□ 0.64
PTPN11-204ENST00000531326 DLG4P78352 724 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 CLDN10P78369 228 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 TYRO3Q06418 890 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 BFSP1Q12934 665 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 CT47A1Q5JQC4 288 aaPredicted RBP19.08■□□□□ 0.64
PTPN11-204ENST00000531326 INTS6LQ5JSJ4 861 aaKnown RBP19.08■□□□□ 0.64
PTPN11-204ENST00000531326 C1orf220Q5T0J3 134 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 C11orf57Q6ZUT1 292 aaPredicted RBP19.08■□□□□ 0.64
PTPN11-204ENST00000531326 FILIP1Q7Z7B0 1213 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 MON1AQ86VX9 555 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 CSGALNACT2Q8N6G5 542 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 LRRC52Q8N7C0 313 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 NETO1Q8TDF5 533 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 TMC2Q8TDI7 906 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 ZNF516Q92618 1163 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 CEP63Q96MT8 703 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 CNTNAP3BQ96NU0 1288 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 FNBP1Q96RU3 617 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 FUCA2Q9BTY2 467 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 CNTNAP3Q9BZ76 1288 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 MTMR12Q9C0I1 747 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 FBRSL1Q9HCM7 1045 aaKnown RBP19.08■□□□□ 0.64
PTPN11-204ENST00000531326 GDAP2Q9NXN4 497 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 GTF3C4Q9UKN8 822 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 EML5Q05BV3 1969 aa19.08■□□□□ 0.64
PTPN11-204ENST00000531326 SDK1Q7Z5N4 2213 aa19.07■□□□□ 0.64
PTPN11-204ENST00000531326 TRDMT1O14717 391 aaKnown RBP19.07■□□□□ 0.64
PTPN11-204ENST00000531326 HUS1O60921 280 aa19.07■□□□□ 0.64
PTPN11-204ENST00000531326 NOL4O94818 638 aa19.07■□□□□ 0.64
PTPN11-204ENST00000531326 LETM1O95202 739 aaPredicted RBP19.07■□□□□ 0.64
PTPN11-204ENST00000531326 EPB41P11171 864 aaKnown RBP19.07■□□□□ 0.64
PTPN11-204ENST00000531326 ENPEPQ07075 957 aa19.07■□□□□ 0.64
PTPN11-204ENST00000531326 NAIF1Q69YI7 327 aaPredicted RBP19.07■□□□□ 0.64
PTPN11-204ENST00000531326 INTS8Q75QN2 995 aaKnown RBP19.07■□□□□ 0.64
PTPN11-204ENST00000531326 CEP68Q76N32 757 aa19.07■□□□□ 0.64
PTPN11-204ENST00000531326 TMEM86AQ8N2M4 240 aa19.07■□□□□ 0.64
PTPN11-204ENST00000531326 CACTINQ8WUQ7 758 aaKnown RBP19.07■□□□□ 0.64
PTPN11-204ENST00000531326 MRPS31Q92665 395 aaKnown RBP19.07■□□□□ 0.64
PTPN11-204ENST00000531326 SLC22A12Q96S37 553 aa19.07■□□□□ 0.64
PTPN11-204ENST00000531326 SRRTQ9BXP5 876 aaKnown RBP19.07■□□□□ 0.64
PTPN11-204ENST00000531326 KIF9Q9HAQ2 790 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms