RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 ANKRD52Q8NB46 1076 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 ZMIZ2Q8NF64 920 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 PLVAPQ9BX97 442 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 DUSP16Q9BY84 665 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 LACRTQ9GZZ8 138 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 THAP2Q9H0W7 228 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 PRO3102Q9H379 93 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 ADAM22Q9P0K1 906 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 PCDHB5Q9Y5E4 795 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 DUSP10Q9Y6W6 482 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 MACROD2A1Z1Q3 448 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 C5orf67F2Z3F1 127 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 RTN2O75298 545 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 LSM8O95777 96 aaKnown RBP11.25□□□□□ -0.61
SOX6-213ENST00000530378 H2AFZP0C0S5 128 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 VAV2P52735 878 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 DUSP4Q13115 394 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 GPR17Q13304 367 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 STILQ15468 1287 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 MGAT5BQ3V5L5 792 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 HS1BP3Q53T59 392 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 SLC8B1Q6J4K2 584 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 ACAD10Q6JQN1 1059 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 H2AFVQ71UI9 128 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 MON1BQ7L1V2 547 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 RBM23Q86U06 439 aaKnown RBP11.25□□□□□ -0.61
SOX6-213ENST00000530378 PIGZQ86VD9 579 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 ERICH1Q86X53 443 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 CLEC4CQ8WTT0 213 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 NDRG1Q92597 394 aaKnown RBP11.25□□□□□ -0.61
SOX6-213ENST00000530378 PIWIL1Q96J94 861 aaKnown RBP11.25□□□□□ -0.61
SOX6-213ENST00000530378 PPP1R13BQ96KQ4 1090 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 MIS12Q9H081 205 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 BACE2Q9Y5Z0 518 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 ATP8B3O60423 1300 aa11.25□□□□□ -0.61
SOX6-213ENST00000530378 GREB1Q4ZG55 1949 aa11.24□□□□□ -0.61
SOX6-213ENST00000530378 DOCK6Q96HP0 2047 aa11.24□□□□□ -0.61
SOX6-213ENST00000530378 PRRC2BQ5JSZ5 2229 aaKnown RBP11.24□□□□□ -0.61
SOX6-213ENST00000530378 CARNS1A5YM72 827 aa11.24□□□□□ -0.61
SOX6-213ENST00000530378 C2orf71A6NGG8 1288 aa11.24□□□□□ -0.61
SOX6-213ENST00000530378 SEC24AO95486 1093 aa11.24□□□□□ -0.61
SOX6-213ENST00000530378 RRM1P23921 792 aa11.24□□□□□ -0.61
SOX6-213ENST00000530378 ANXA13P27216 316 aa11.24□□□□□ -0.61
SOX6-213ENST00000530378 NDUFV1P49821 464 aa11.24□□□□□ -0.61
SOX6-213ENST00000530378 KRT83P78385 493 aa11.24□□□□□ -0.61
SOX6-213ENST00000530378 ADIGQ0VDE8 80 aa11.24□□□□□ -0.61
SOX6-213ENST00000530378 SMC1AQ14683 1233 aaKnown RBP11.24□□□□□ -0.61
SOX6-213ENST00000530378 MAPRE1Q15691 268 aaKnown RBP11.24□□□□□ -0.61
SOX6-213ENST00000530378 NFE2Q16621 373 aaPredicted RBP11.24□□□□□ -0.61
SOX6-213ENST00000530378 PTPROQ16827 1216 aa11.24□□□□□ -0.61
SOX6-213ENST00000530378 MCOLN2Q8IZK6 566 aa11.24□□□□□ -0.61
SOX6-213ENST00000530378 CCAR2Q8N163 923 aaKnown RBP11.24□□□□□ -0.61
SOX6-213ENST00000530378 KIAA1524Q8TCG1 905 aa11.24□□□□□ -0.61
SOX6-213ENST00000530378 LHX5Q9H2C1 402 aa11.24□□□□□ -0.61
SOX6-213ENST00000530378 DMAP1Q9NPF5 467 aaPredicted RBP11.24□□□□□ -0.61
SOX6-213ENST00000530378 H3BNC9 293 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 PER2O15055 1255 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 BUB1O43683 1085 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 LILRB3O75022 631 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 GRAP2O75791 330 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 GABBR2O75899 941 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 SETSIPP0DME0 302 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 GZMAP12544 262 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 KLRC2P26717 231 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 CDH5P33151 784 aaPredicted RBP11.23□□□□□ -0.61
SOX6-213ENST00000530378 SLC8A3P57103 927 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 RBM10P98175 930 aaKnown RBP11.23□□□□□ -0.61
SOX6-213ENST00000530378 OR6B2Q6IFH4 312 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 FAM183BPQ6ZVS7 135 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 ADGRD2Q7Z7M1 963 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 SCAMP5Q8TAC9 235 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 IPO4Q8TEX9 1081 aaKnown RBP11.23□□□□□ -0.61
SOX6-213ENST00000530378 GIPC2Q8TF65 315 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 SLC35F5Q8WV83 523 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 CTNNBL1Q8WYA6 563 aaPredicted RBP11.23□□□□□ -0.61
SOX6-213ENST00000530378 NOX5Q96PH1 765 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 KLHL5Q96PQ7 755 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 ISCUQ9H1K1 167 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 CYP4F11Q9HBI6 524 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 CNOT8Q9UFF9 292 aaKnown RBP11.23□□□□□ -0.61
SOX6-213ENST00000530378 GUCA1BQ9UMX6 200 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 LZTS1Q9Y250 596 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 PAXBP1Q9Y5B6 917 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 PRRG1O14668 218 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 XPO1O14980 1071 aaKnown RBP11.23□□□□□ -0.61
SOX6-213ENST00000530378 LPXNO60711 386 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 RB1P06400 928 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 MMP8P22894 467 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 ARHGAP25P42331 645 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 PLA2G4AP47712 749 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 NAP1L1P55209 391 aaKnown RBP11.23□□□□□ -0.61
SOX6-213ENST00000530378 PTP4A2Q12974 167 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 MTMR3Q13615 1198 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 ARHGAP29Q52LW3 1261 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 PHF13Q86YI8 300 aaPredicted RBP11.23□□□□□ -0.61
SOX6-213ENST00000530378 REXO1L1PQ8IX06 675 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 SCUBE3Q8IX30 993 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 SIX6OS1Q8N1H7 587 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 BTBD6Q96KE9 485 aa11.23□□□□□ -0.61
SOX6-213ENST00000530378 SAMD11Q96NU1 681 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms