RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 POU5F2Q8N7G0 328 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 CHST13Q8NET6 341 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 GSDMBQ8TAX9 411 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 RNF139Q8WU17 664 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 PORCNQ9H237 461 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 RSAD1Q9HA92 442 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 SLC5A4Q9NY91 659 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 BFARQ9NZS9 450 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 H3BRB1 525 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 M0QYT0 321 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 PLSCR1O15162 318 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 MYL2P10916 166 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 RBL1P28749 1068 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 GNL1P36915 607 aaPredicted RBP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 AVPR1AP37288 418 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 FAAP100Q0VG06 881 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 KBTBD12Q3ZCT8 623 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 FASTKD1Q53R41 847 aaKnown RBP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 ZC3H12AQ5D1E8 599 aaKnown RBP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 EFHC2Q5JST6 749 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 SLC9A9Q8IVB4 645 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 GLIS1Q8NBF1 620 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 SKA2Q8WVK7 121 aaPredicted RBP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 NDRG1Q92597 394 aaKnown RBP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 BHMTQ93088 406 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 TMEM176AQ96HP8 235 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 OSBPL7Q9BZF2 842 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 VCX3BQ9H321 246 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 ATXN3LQ9H3M9 355 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 TUT1Q9H6E5 874 aaKnown RBP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 APOBEC3GQ9HC16 384 aaKnown RBP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 PRMT7Q9NVM4 692 aaPredicted RBP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 SMG5Q9UPR3 1016 aaKnown RBP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 GOLGA8QA0A0J9YX86 632 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 GOLGA8OA6NCC3 632 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 GOLGA8NF8WBI6 632 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 NCAM1P13591 858 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 AMPD1P23109 780 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 TPD52P55327 224 aaPredicted RBP12.87□□□□□ -0.35
SCN3B-206ENST00000530277 RPL10AP62906 217 aaKnown RBP12.87□□□□□ -0.35
SCN3B-206ENST00000530277 CUL3Q13618 768 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 MYBPC2Q14324 1141 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 SYDE1Q6ZW31 735 aaPredicted RBP12.87□□□□□ -0.35
SCN3B-206ENST00000530277 LRRC43Q8N309 656 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 NCANO14594 1321 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 ZMYM2Q9UBW7 1377 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 CCL15-CCL14A0A0B4J2E2 113 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 DNALI1O14645 258 aaPredicted RBP12.87□□□□□ -0.35
SCN3B-206ENST00000530277 HMGCRP04035 888 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 MUTP22033 750 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 ELF1P32519 619 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 HSD17B4P51659 736 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 CCL15Q16663 113 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 MREGQ8N565 214 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 PGM2Q96G03 612 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 CELF6Q96J87 481 aaKnown RBP12.87□□□□□ -0.35
SCN3B-206ENST00000530277 FSD1LQ9BXM9 530 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 SUDS3Q9H7L9 328 aaPredicted RBP12.87□□□□□ -0.35
SCN3B-206ENST00000530277 LRRC4CQ9HCJ2 640 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 FAM53CQ9NYF3 392 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 GRIN2DO15399 1336 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 AKAP11Q9UKA4 1901 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 DCAF8L1A6NGE4 600 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 MICAL2O94851 1124 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 CYP1A2P05177 515 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 GTF2A2P52657 109 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 RABGGTBP53611 331 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 DEUP1Q05D60 604 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 STX3Q13277 289 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 UNC45BQ8IWX7 931 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 EXOC8Q8IYI6 725 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 CYP4X1Q8N118 509 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 APPL2Q8NEU8 664 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 SPON2Q9BUD6 331 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 RPS6KL1Q9Y6S9 549 aa12.87□□□□□ -0.35
SCN3B-206ENST00000530277 LAMA4Q16363 1823 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 CFAP73A6NFT4 308 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 MAP3K7O43318 606 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 SNX3O60493 162 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 CCDC130P13994 396 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 KCNA4P22459 653 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 TPI1P60174 286 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 AP1ARQ63HQ0 302 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 BRSK2Q8IWQ3 736 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 RDM1Q8NG50 284 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 SARS2Q9NP81 518 aaKnown RBP12.86□□□□□ -0.35
SCN3B-206ENST00000530277 DMAC2Q9NW81 257 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 NOCTQ9UK39 431 aaKnown RBP12.86□□□□□ -0.35
SCN3B-206ENST00000530277 KNL1Q8NG31 2342 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 LRP6O75581 1613 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 MYH7P12883 1935 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 AIM2O14862 343 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 PMPCBO75439 489 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 FAM155BO75949 473 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 C1QBPQ07021 282 aaKnown RBP12.86□□□□□ -0.35
SCN3B-206ENST00000530277 ART3Q13508 389 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 PRPSAP1Q14558 356 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 LAYNQ6UX15 382 aa12.86□□□□□ -0.35
SCN3B-206ENST00000530277 TMEM192Q8IY95 271 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms