RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 CARNMT1Q8N4J0 409 aa8.43□□□□□ -1.06
CTNND1-220ENST00000529526 EMC1Q8N766 993 aa8.43□□□□□ -1.06
CTNND1-220ENST00000529526 BTN2A2Q8WVV5 523 aa8.43□□□□□ -1.06
CTNND1-220ENST00000529526 DNAJC9Q8WXX5 260 aa8.43□□□□□ -1.06
CTNND1-220ENST00000529526 CYP4F12Q9HCS2 524 aa8.43□□□□□ -1.06
CTNND1-220ENST00000529526 DDTLA6NHG4 134 aaPredicted RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 ARHGEF9O43307 516 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 KDM1AO60341 852 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 FAM107AO95990 144 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 LRG1P02750 347 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 EPB42P16452 691 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 PBLDP30039 288 aaPredicted RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 MAP3K10Q02779 954 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 TFDP3Q5H9I0 405 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 ZNF571Q7Z3V5 609 aaPredicted RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 LINC00523Q86TU6 105 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 COL23A1Q86Y22 540 aaPredicted RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 GTF3C2Q8WUA4 911 aaPredicted RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 CNDP1Q96KN2 507 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 PPP1R2P1Q96PQ5 205 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 AGO4Q9HCK5 861 aaKnown RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 GID8Q9NWU2 228 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 LRRIQ3A6PVS8 624 aaPredicted RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 PSMC6P62333 389 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 ZNF177Q13360 481 aaPredicted RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 TRIM60Q495X7 471 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 DAB2IPQ5VWQ8 1189 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 TTI2Q6NXR4 508 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 PRUNE1Q86TP1 453 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 AGBL3Q8NEM8 1001 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 SCUBE2Q9NQ36 999 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 RIC8BQ9NVN3 520 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 TRMT6Q9UJA5 497 aaKnown RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 HAO1Q9UJM8 370 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 MRPL42Q9Y6G3 142 aaKnown RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 TPST1O60507 370 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 ANXA9O76027 345 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 B3GAT3O94766 335 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 SUPT7LO94864 414 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 WDR47O94967 919 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 CCND1P24385 295 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 RPS12P25398 132 aaKnown RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 ALDH7A1P49419 539 aaKnown RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 MYL6P60660 151 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 PWP1Q13610 501 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 FAM83EQ2M2I3 478 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 Q4G0T1 1027 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 BOLA3Q53S33 107 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 STX19Q8N4C7 294 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 TAS1R2Q8TE23 839 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 KAZALD1Q96I82 304 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 CGRRF1Q99675 332 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 VPS33BQ9H267 617 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 NMRK2Q9NPI5 230 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 CHST12Q9NRB3 414 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 HEY2Q9UBP5 337 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 PLAGL2Q9UPG8 496 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 STX7O15400 261 aaKnown RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 TFE3P19532 575 aaPredicted RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 RRM1P23921 792 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 SERPINB10P48595 397 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 TRPC1P48995 793 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 COPAP53621 1224 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 GEMP55040 296 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 CYP24A1Q07973 514 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 DEPDC1Q5TB30 811 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 SLFN11Q7Z7L1 901 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 SRPK1Q96SB4 655 aaKnown RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 CARD9Q9H257 536 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 CCDC134Q9H6E4 229 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 C17orf75Q9HAS0 396 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 CD248Q9HCU0 757 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 SPASTQ9UBP0 616 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 CEMIPQ8WUJ3 1361 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 VDRP11473 427 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 CENPAP49450 140 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 KLC1Q07866 573 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 DDX39BQ13838 428 aaKnown RBP8.42□□□□□ -1.06
CTNND1-220ENST00000529526 OLFML2BQ68BL8 750 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 CCDC81Q6ZN84 652 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 UBP1Q9NZI7 540 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 USP18Q9UMW8 372 aa8.42□□□□□ -1.06
CTNND1-220ENST00000529526 ENO4A6NNW6 628 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 F5H5T6 163 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 F8VZ95 297 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 SMAPO00193 183 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 SPTLC1O15269 473 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 CYTH3O43739 400 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 AKAP3O75969 853 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 ASS1P00966 412 aaKnown RBP8.41□□□□□ -1.06
CTNND1-220ENST00000529526 HNRNPCP07910 306 aaKnown RBP eCLIP8.41□□□□□ -1.069e-7■■■■□ 20.8
CTNND1-220ENST00000529526 MBL2P11226 248 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-220ENST00000529526 CDH2P19022 906 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-220ENST00000529526 LY6KQ17RY6 165 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 KDM7AQ6ZMT4 941 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 SPOCD1Q6ZMY3 1216 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 FBXO32Q969P5 355 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 FICDQ9BVA6 458 aa8.41□□□□□ -1.06
CTNND1-220ENST00000529526 PABPC3Q9H361 631 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms