RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 DMAC2Q9NW81 257 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 CHMP5Q9NZZ3 219 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 CTNND2Q9UQB3 1225 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 PCDHA5Q9Y5H7 936 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 ZNF318Q5VUA4 2279 aa9.66□□□□□ -0.86
CMTM1-210ENST00000528441 TRIM49BA6NDI0 452 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 NRG2O14511 850 aaPredicted RBP9.65□□□□□ -0.86
CMTM1-210ENST00000528441 IKBKBO14920 756 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 GFRA3O60609 400 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 NOL4O94818 638 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 PRAMEF12O95522 483 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 STAU1O95793 577 aaKnown RBP9.65□□□□□ -0.86
CMTM1-210ENST00000528441 NUDT7P0C024 238 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 MBL2P11226 248 aaPredicted RBP9.65□□□□□ -0.86
CMTM1-210ENST00000528441 HDCP19113 662 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 TARSP26639 723 aaKnown RBP9.65□□□□□ -0.86
CMTM1-210ENST00000528441 PPP1R2P41236 205 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 MAGEA11P43364 429 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 SOX9P48436 509 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 NDST1P52848 882 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 FKBP3Q00688 224 aaKnown RBP9.65□□□□□ -0.86
CMTM1-210ENST00000528441 AMPD2Q01433 879 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 CETN1Q12798 172 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 TPD52L1Q16890 204 aaPredicted RBP9.65□□□□□ -0.86
CMTM1-210ENST00000528441 EDRF1Q3B7T1 1238 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 ZNF394Q53GI3 561 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 KRT39Q6A163 491 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 FAM171BQ6P995 826 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 FAM35AQ86V20 835 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 ARL14EPQ8N8R7 260 aaPredicted RBP9.65□□□□□ -0.86
CMTM1-210ENST00000528441 CXorf38Q8TB03 319 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 SMARCD1Q96GM5 515 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 TIGD1Q96MW7 591 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 SLC46A2Q9BY10 475 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 C8orf33Q9H7E9 229 aaPredicted RBP9.65□□□□□ -0.86
CMTM1-210ENST00000528441 IL21Q9HBE4 155 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 TMEM8AQ9HCN3 771 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 DMAP1Q9NPF5 467 aaPredicted RBP9.65□□□□□ -0.86
CMTM1-210ENST00000528441 KRT82Q9NSB4 513 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 TDP1Q9NUW8 608 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 GTSE1Q9NYZ3 720 aa9.65□□□□□ -0.86
CMTM1-210ENST00000528441 BICDL2A1A5D9 508 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 MAPK13O15264 365 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 GADD45BO75293 160 aaPredicted RBP9.64□□□□□ -0.87
CMTM1-210ENST00000528441 RTN3O95197 1032 aaPredicted RBP9.64□□□□□ -0.87
CMTM1-210ENST00000528441 VNN1O95497 513 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 F11P03951 625 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 FAM163BP0C2L3 166 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 FAM200BP0CF97 657 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 CCDC130P13994 396 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 HMGA1P17096 107 aaKnown RBP9.64□□□□□ -0.87
CMTM1-210ENST00000528441 YWHAQP27348 245 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 MAGEA9P43362 315 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 STX17P56962 302 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 MAP3K7CLP57077 242 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 SLC8A3P57103 927 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 CSTF1Q05048 431 aaKnown RBP9.64□□□□□ -0.87
CMTM1-210ENST00000528441 LRRC63Q05C16 580 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 MTF1Q14872 753 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 PON2Q15165 354 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 ITPRIPL2Q3MIP1 535 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 TRIM68Q6AZZ1 485 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 C1orf228Q6PIY5 440 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 FRMD5Q7Z6J6 570 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 MON1AQ86VX9 555 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 C1orf210Q8IVY1 113 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 NUP93Q8N1F7 819 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 CPA6Q8N4T0 437 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 SLC2A14Q8TDB8 520 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 TAS1R2Q8TE23 839 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 NELFBQ8WX92 580 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 NKD2Q969F2 451 aaPredicted RBP9.64□□□□□ -0.87
CMTM1-210ENST00000528441 TRMT2BQ96GJ1 504 aaKnown RBP9.64□□□□□ -0.87
CMTM1-210ENST00000528441 MSANTD3Q96H12 275 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 IPO9Q96P70 1041 aaKnown RBP9.64□□□□□ -0.87
CMTM1-210ENST00000528441 PHOX2BQ99453 314 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 MKNK1Q9BUB5 465 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 NT5C1AQ9BXI3 368 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 B3GNT5Q9BYG0 378 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 NIF3L1Q9GZT8 377 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 EBF3Q9H4W6 596 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 LMAN1LQ9HAT1 526 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 TRPV4Q9HBA0 871 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 GKN1Q9NS71 199 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 DUS2Q9NX74 493 aaKnown RBP9.64□□□□□ -0.87
CMTM1-210ENST00000528441 SMPD4Q9NXE4 827 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 OBP2AQ9NY56 170 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 ARMCX3Q9UH62 379 aaPredicted RBP9.64□□□□□ -0.87
CMTM1-210ENST00000528441 MAN1B1Q9UKM7 699 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 SH3BP1Q9Y3L3 701 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 MTF2Q9Y483 593 aaPredicted RBP9.64□□□□□ -0.87
CMTM1-210ENST00000528441 MUC6Q6W4X9 2439 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 COL4A3Q01955 1670 aa9.64□□□□□ -0.87
CMTM1-210ENST00000528441 C2orf78A6NCI8 922 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 SPECC1L-ADORA2AF8WAN1 911 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 SLC16A3O15427 465 aaKnown RBP9.63□□□□□ -0.87
CMTM1-210ENST00000528441 ASS1P00966 412 aaKnown RBP9.63□□□□□ -0.87
CMTM1-210ENST00000528441 IRF1P10914 325 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 CD19P15391 556 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 UBE2HP62256 183 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms