RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 HESX1Q9UBX0 185 aa8.12□□□□□ -1.11
SOX6-211ENST00000528429 NME7Q9Y5B8 376 aa8.12□□□□□ -1.11
SOX6-211ENST00000528429 TIMM13Q9Y5L4 95 aaPredicted RBP8.12□□□□□ -1.11
SOX6-211ENST00000528429 F8VP50 259 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 CYB561D2O14569 222 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 RAD51CO43502 376 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 HEXIM1O94992 359 aaKnown RBP8.11□□□□□ -1.11
SOX6-211ENST00000528429 KRT3P12035 628 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 ACAT1P24752 427 aaKnown RBP8.11□□□□□ -1.11
SOX6-211ENST00000528429 TPP2P29144 1249 aaPredicted RBP8.11□□□□□ -1.11
SOX6-211ENST00000528429 CDH5P33151 784 aaPredicted RBP8.11□□□□□ -1.11
SOX6-211ENST00000528429 RFC1P35251 1148 aaPredicted RBP8.11□□□□□ -1.11
SOX6-211ENST00000528429 TAS2R40P59535 323 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 GUCY2DQ02846 1103 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 WSCD1Q658N2 575 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 C3orf20Q8ND61 904 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 HASPINQ8TF76 798 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 KBTBD7Q8WVZ9 684 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 VMP1Q96GC9 406 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 PAAF1Q9BRP4 392 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 TSEN34Q9BSV6 310 aaKnown RBP8.11□□□□□ -1.11
SOX6-211ENST00000528429 RNF208Q9H0X6 261 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 RSAD1Q9HA92 442 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 METTL5Q9NRN9 209 aaKnown RBP8.11□□□□□ -1.11
SOX6-211ENST00000528429 STIM2Q9P246 746 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 AMACRQ9UHK6 382 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 RAB21Q9UL25 225 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 STRIP2Q9ULQ0 834 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 PCDHA3Q9Y5H8 950 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 GOLGA6L10A0A0M3HER8 536 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 TARSL2A2RTX5 802 aaKnown RBP8.11□□□□□ -1.11
SOX6-211ENST00000528429 TMEM191CA6NGB0 347 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 E5RJQ4 531 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 I3L4J1 428 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 PODXLO00592 558 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 SART1O43290 800 aaKnown RBP8.11□□□□□ -1.11
SOX6-211ENST00000528429 GRAP2O75791 330 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 GLI1P08151 1106 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 TCF4P15884 667 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 SLC1A1P43005 524 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 GPD2P43304 727 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 ATN1P54259 1190 aaPredicted RBP8.11□□□□□ -1.11
SOX6-211ENST00000528429 PRMT2P55345 433 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 OGDHQ02218 1023 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.11□□□□□ -1.11
SOX6-211ENST00000528429 FAM102AQ5T9C2 384 aaPredicted RBP8.11□□□□□ -1.11
SOX6-211ENST00000528429 OR6B2Q6IFH4 312 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 LCLAT1Q6UWP7 414 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 DRAXINQ8NBI3 349 aaPredicted RBP8.11□□□□□ -1.11
SOX6-211ENST00000528429 JOSD2Q8TAC2 188 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 USP33Q8TEY7 942 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 IFT81Q8WYA0 676 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 ACSF2Q96CM8 615 aaPredicted RBP8.11□□□□□ -1.11
SOX6-211ENST00000528429 NAP1L3Q99457 506 aaPredicted RBP8.11□□□□□ -1.11
SOX6-211ENST00000528429 EPB41L5Q9HCM4 733 aa8.11□□□□□ -1.11
SOX6-211ENST00000528429 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.11□□□□□ -1.11
SOX6-211ENST00000528429 A0A0U1RQF3 1178 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 TCRBV7S2A1N4TA0A589 114 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 PI4K2BG5E9Z4 385 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 ARVCFO00192 962 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 PQBP1O60828 265 aaKnown RBP8.1□□□□□ -1.11
SOX6-211ENST00000528429 ATP2C2O75185 946 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 B3GAT3O94766 335 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 MCM3P25205 808 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 PSMA2P25787 234 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 RAB27AP51159 221 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 NSUN2Q08J23 767 aaKnown RBP eCLIP8.1□□□□□ -1.11
SOX6-211ENST00000528429 SNX1Q13596 522 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 SMC1AQ14683 1233 aaKnown RBP8.1□□□□□ -1.11
SOX6-211ENST00000528429 MBTPS1Q14703 1052 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 ODF2Q5BJF6 829 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 WDR93Q6P2C0 686 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 DSTYKQ6XUX3 929 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 XYLT1Q86Y38 959 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 C3orf58Q8NDZ4 430 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 SENP8Q96LD8 212 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 SH3GL3Q99963 347 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 PLVAPQ9BX97 442 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 HEMGNQ9BXL5 484 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 MIS12Q9H081 205 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 GDAP2Q9NXN4 497 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 SAGE1Q9NXZ1 904 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 TMEM59LQ9UK28 342 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 KIAA1257Q9ULG3 409 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 GIT1Q9Y2X7 761 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 CCDC188H7C350 402 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 TUBBP07437 444 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 CTNNA2P26232 953 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 LRPAP1P30533 357 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 MAGEA10P43363 369 aaPredicted RBP8.1□□□□□ -1.11
SOX6-211ENST00000528429 ZNF252P-AS1Q0IIN9 211 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 USP4Q13107 963 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 SLC5A9Q2M3M2 681 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 ATP13A4Q4VNC1 1196 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 PMF1Q6P1K2 205 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 UNC93AQ86WB7 457 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 OSTM1Q86WC4 334 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 RHOT1Q8IXI2 618 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 PLPP6Q8IY26 295 aa8.1□□□□□ -1.11
SOX6-211ENST00000528429 SLC2A14Q8TDB8 520 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms