RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 OSBPL6Q9BZF3 934 aa16.52■□□□□ 0.24
CAPN1-213ENST00000527897 TMEM8AQ9HCN3 771 aa16.52■□□□□ 0.24
CAPN1-213ENST00000527897 TRPV5Q9NQA5 729 aa16.52■□□□□ 0.24
CAPN1-213ENST00000527897 GKN1Q9NS71 199 aa16.52■□□□□ 0.24
CAPN1-213ENST00000527897 FAM49BQ9NUQ9 324 aa16.52■□□□□ 0.24
CAPN1-213ENST00000527897 TMEM30AQ9NV96 361 aa16.52■□□□□ 0.24
CAPN1-213ENST00000527897 TRPM5Q9NZQ8 1165 aa16.52■□□□□ 0.24
CAPN1-213ENST00000527897 MAN1B1Q9UKM7 699 aa16.52■□□□□ 0.24
CAPN1-213ENST00000527897 USP34Q70CQ2 3546 aa16.52■□□□□ 0.23
CAPN1-213ENST00000527897 MYO15AQ9UKN7 3530 aa16.52■□□□□ 0.23
CAPN1-213ENST00000527897 F5P12259 2224 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 SHISA7A6NL88 538 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 PSMA7O14818 248 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 LAMTOR5O43504 91 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 AP1G2O75843 785 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 USP17L7P0C7H9 530 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 CCDC130P13994 396 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 WEE1P30291 646 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 ASPAP45381 313 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 MXI1P50539 228 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 PLCB2Q00722 1185 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 KRT39Q6A163 491 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 TRIM68Q6AZZ1 485 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 CC2D1AQ6P1N0 951 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-213ENST00000527897 ADSSL1Q8N142 457 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 SPATA20Q8TB22 786 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 C8orf48Q96LL4 319 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 KCNK16Q96T55 309 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 EBF3Q9H4W6 596 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 KIF9Q9HAQ2 790 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 APOBEC3GQ9HC16 384 aaKnown RBP16.51■□□□□ 0.23
CAPN1-213ENST00000527897 EHD2Q9NZN4 543 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 CHMP5Q9NZZ3 219 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 CACNA1IQ9P0X4 2223 aa16.51■□□□□ 0.23
CAPN1-213ENST00000527897 SPECC1L-ADORA2AF8WAN1 911 aa16.5■□□□□ 0.23
CAPN1-213ENST00000527897 STX10O60499 249 aa16.5■□□□□ 0.23
CAPN1-213ENST00000527897 HDCP19113 662 aa16.5■□□□□ 0.23
CAPN1-213ENST00000527897 TRIM21P19474 475 aaKnown RBP16.5■□□□□ 0.23
CAPN1-213ENST00000527897 ADORA2BP29275 332 aa16.5■□□□□ 0.23
CAPN1-213ENST00000527897 ANP32AP39687 249 aaKnown RBP16.5■□□□□ 0.23
CAPN1-213ENST00000527897 FKBP3Q00688 224 aaKnown RBP16.5■□□□□ 0.23
CAPN1-213ENST00000527897 C12orf29Q8N999 325 aa16.5■□□□□ 0.23
CAPN1-213ENST00000527897 SLC2A14Q8TDB8 520 aa16.5■□□□□ 0.23
CAPN1-213ENST00000527897 CEP295NLQ96MC4 621 aa16.5■□□□□ 0.23
CAPN1-213ENST00000527897 GTPBP4Q9BZE4 634 aaKnown RBP16.5■□□□□ 0.23
CAPN1-213ENST00000527897 NIF3L1Q9GZT8 377 aa16.5■□□□□ 0.23
CAPN1-213ENST00000527897 C8orf33Q9H7E9 229 aaPredicted RBP16.5■□□□□ 0.23
CAPN1-213ENST00000527897 LMAN1LQ9HAT1 526 aa16.5■□□□□ 0.23
CAPN1-213ENST00000527897 KRT82Q9NSB4 513 aa16.5■□□□□ 0.23
CAPN1-213ENST00000527897 R4GN57 208 aa16.5■□□□□ 0.23
CAPN1-213ENST00000527897 PIEZO1Q92508 2521 aa16.5■□□□□ 0.23
CAPN1-213ENST00000527897 PATJQ8NI35 1801 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 GFRA3O60609 400 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 CD44P16070 742 aaKnown RBP16.49■□□□□ 0.23
CAPN1-213ENST00000527897 GTF2H1P32780 548 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 CTHP32929 405 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 MAGEA9P43362 315 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 CSTF1Q05048 431 aaKnown RBP16.49■□□□□ 0.23
CAPN1-213ENST00000527897 ENPEPQ07075 957 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 TAF10Q12962 218 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 ITPRIPL2Q3MIP1 535 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 ZNF394Q53GI3 561 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 COBLL1Q53SF7 1204 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 WDR44Q5JSH3 913 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 TXNDC11Q6PKC3 985 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 FUKQ8N0W3 1084 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 NUP93Q8N1F7 819 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 RIN3Q8TB24 985 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 SEMA4DQ92854 862 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 FBXO32Q969P5 355 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 JAKMIP2Q96AA8 810 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 SMARCD1Q96GM5 515 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 SLITRK1Q96PX8 696 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 TTLL2Q9BWV7 592 aa16.49■□□□□ 0.23
CAPN1-213ENST00000527897 DMAP1Q9NPF5 467 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-213ENST00000527897 SOBPA7XYQ1 873 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 SLC16A3O15427 465 aaKnown RBP16.48■□□□□ 0.23
CAPN1-213ENST00000527897 SP9P0CG40 484 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 ARSAP15289 507 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 YWHAQP27348 245 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 NBL1P41271 181 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 IFNAR2P48551 515 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 MAP3K7CLP57077 242 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 LRRC63Q05C16 580 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 RUNX3Q13761 415 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 MTF1Q14872 753 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 PON2Q15165 354 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 CCDC40Q4G0X9 1142 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 PAQR9Q6ZVX9 377 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 UNC93AQ86WB7 457 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 RALGPS2Q86X27 583 aaPredicted RBP16.48■□□□□ 0.23
CAPN1-213ENST00000527897 FBXL13Q8NEE6 735 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 SCAMP5Q8TAC9 235 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 SH3RF2Q8TEC5 729 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 CLDN23Q96B33 292 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 MSANTD3Q96H12 275 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 TWNKQ96RR1 684 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 NT5C1AQ9BXI3 368 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 CYP3A43Q9HB55 503 aa16.48■□□□□ 0.23
CAPN1-213ENST00000527897 RBM12Q9NTZ6 932 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms