RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 USP46P62068 366 aa20.52■□□□□ 0.88
CAPN1-211ENST00000527739 LRRC32Q14392 662 aa20.52■□□□□ 0.88
CAPN1-211ENST00000527739 TXNDC11Q6PKC3 985 aa20.52■□□□□ 0.88
CAPN1-211ENST00000527739 FAM186BQ8IYM0 893 aa20.52■□□□□ 0.88
CAPN1-211ENST00000527739 SMYD4Q8IYR2 804 aaPredicted RBP20.52■□□□□ 0.88
CAPN1-211ENST00000527739 ZNF687Q8N1G0 1237 aa20.52■□□□□ 0.88
CAPN1-211ENST00000527739 GUF1Q8N442 669 aaKnown RBP20.52■□□□□ 0.88
CAPN1-211ENST00000527739 C8orf48Q96LL4 319 aa20.52■□□□□ 0.88
CAPN1-211ENST00000527739 SLC22A12Q96S37 553 aa20.52■□□□□ 0.88
CAPN1-211ENST00000527739 ELOVL4Q9GZR5 314 aa20.52■□□□□ 0.88
CAPN1-211ENST00000527739 CHRDQ9H2X0 955 aa20.52■□□□□ 0.88
CAPN1-211ENST00000527739 VRTNQ9H8Y1 702 aa20.52■□□□□ 0.88
CAPN1-211ENST00000527739 EHD2Q9NZN4 543 aa20.52■□□□□ 0.88
CAPN1-211ENST00000527739 MED19A0JLT2 244 aaPredicted RBP20.51■□□□□ 0.87
CAPN1-211ENST00000527739 IKBKBO14920 756 aa20.51■□□□□ 0.87
CAPN1-211ENST00000527739 KINO60870 393 aaKnown RBP20.51■□□□□ 0.87
CAPN1-211ENST00000527739 TRIM49P0CI25 452 aa20.51■□□□□ 0.87
CAPN1-211ENST00000527739 TRIM49CP0CI26 452 aa20.51■□□□□ 0.87
CAPN1-211ENST00000527739 CHRNB1P11230 501 aa20.51■□□□□ 0.87
CAPN1-211ENST00000527739 HDCP19113 662 aa20.51■□□□□ 0.87
CAPN1-211ENST00000527739 PSMC2P35998 433 aaKnown RBP20.51■□□□□ 0.87
CAPN1-211ENST00000527739 GCLMP48507 274 aa20.51■□□□□ 0.87
CAPN1-211ENST00000527739 FAM160A1Q05DH4 1040 aa20.51■□□□□ 0.87
CAPN1-211ENST00000527739 RUNX3Q13761 415 aa20.51■□□□□ 0.87
CAPN1-211ENST00000527739 ZNF528Q3MIS6 628 aa20.51■□□□□ 0.87
CAPN1-211ENST00000527739 ZACNQ401N2 412 aa20.51■□□□□ 0.87
CAPN1-211ENST00000527739 SPOPLQ6IQ16 392 aa20.51■□□□□ 0.87
CAPN1-211ENST00000527739 TNIP3Q96KP6 325 aa20.51■□□□□ 0.87
CAPN1-211ENST00000527739 SDCBP2Q9H190 292 aa20.51■□□□□ 0.87
CAPN1-211ENST00000527739 ATP8B3O60423 1300 aa20.51■□□□□ 0.87
CAPN1-211ENST00000527739 HLA-DRAP01903 254 aa20.5■□□□□ 0.87
CAPN1-211ENST00000527739 ARSAP15289 507 aa20.5■□□□□ 0.87
CAPN1-211ENST00000527739 CACNA2D1P54289 1103 aa20.5■□□□□ 0.87
CAPN1-211ENST00000527739 ORC1Q13415 861 aa20.5■□□□□ 0.87
CAPN1-211ENST00000527739 ZNF268Q14587 947 aaPredicted RBP20.5■□□□□ 0.87
CAPN1-211ENST00000527739 PPP2R5DQ14738 602 aa20.5■□□□□ 0.87
CAPN1-211ENST00000527739 INTS8Q75QN2 995 aaKnown RBP20.5■□□□□ 0.87
CAPN1-211ENST00000527739 ACOT1Q86TX2 421 aa20.5■□□□□ 0.87
CAPN1-211ENST00000527739 FMR1NBQ8N0W7 255 aaPredicted RBP20.5■□□□□ 0.87
CAPN1-211ENST00000527739 RUBCNQ92622 972 aa20.5■□□□□ 0.87
CAPN1-211ENST00000527739 TAF4BQ92750 862 aa20.5■□□□□ 0.87
CAPN1-211ENST00000527739 EEF2KMTQ96G04 330 aa20.5■□□□□ 0.87
CAPN1-211ENST00000527739 CEP295NLQ96MC4 621 aa20.5■□□□□ 0.87
CAPN1-211ENST00000527739 FAM83CQ9BQN1 747 aa20.5■□□□□ 0.87
CAPN1-211ENST00000527739 IMPG2Q9BZV3 1241 aa20.5■□□□□ 0.87
CAPN1-211ENST00000527739 RMND1Q9NWS8 449 aa20.5■□□□□ 0.87
CAPN1-211ENST00000527739 GPR179Q6PRD1 2367 aa20.5■□□□□ 0.87
CAPN1-211ENST00000527739 MAPK13O15264 365 aa20.49■□□□□ 0.87
CAPN1-211ENST00000527739 CXCL12P48061 93 aa20.49■□□□□ 0.87
CAPN1-211ENST00000527739 MTF1Q14872 753 aa20.49■□□□□ 0.87
CAPN1-211ENST00000527739 PDGFRLQ15198 375 aa20.49■□□□□ 0.87
CAPN1-211ENST00000527739 DGKKQ5KSL6 1271 aa20.49■□□□□ 0.87
CAPN1-211ENST00000527739 C1orf220Q5T0J3 134 aa20.49■□□□□ 0.87
CAPN1-211ENST00000527739 RIN3Q8TB24 985 aa20.49■□□□□ 0.87
CAPN1-211ENST00000527739 SH3RF2Q8TEC5 729 aa20.49■□□□□ 0.87
CAPN1-211ENST00000527739 ERCC4Q92889 916 aaPredicted RBP20.49■□□□□ 0.87
CAPN1-211ENST00000527739 HPS4Q9NQG7 708 aa20.49■□□□□ 0.87
CAPN1-211ENST00000527739 ZSCAN32Q9NX65 697 aa20.49■□□□□ 0.87
CAPN1-211ENST00000527739 DUS2Q9NX74 493 aaKnown RBP20.49■□□□□ 0.87
CAPN1-211ENST00000527739 SMC2O95347 1197 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 IFNAR2P48551 515 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 PDE6CP51160 858 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 CCR3P51677 355 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 NDST1P52848 882 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 NOP14P78316 857 aaKnown RBP20.48■□□□□ 0.87
CAPN1-211ENST00000527739 AMPD2Q01433 879 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 TAF10Q12962 218 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 NFIL3Q16649 462 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 FAM35AQ86V20 835 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 CCDC150Q8NCX0 1101 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 SLITRK1Q96PX8 696 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 KCNK16Q96T55 309 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 IER2Q9BTL4 223 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 TMEM30AQ9NV96 361 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 GCNT4Q9P109 453 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 PCDHGA2Q9Y5H1 932 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 WNT6Q9Y6F9 365 aa20.48■□□□□ 0.87
CAPN1-211ENST00000527739 ZNF840PA6NDX5 716 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 CETN3O15182 167 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 AP1G2O75843 785 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 ASS1P00966 412 aaKnown RBP20.47■□□□□ 0.87
CAPN1-211ENST00000527739 TRIM21P19474 475 aaKnown RBP20.47■□□□□ 0.87
CAPN1-211ENST00000527739 YWHAQP27348 245 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 PPP3CCP48454 512 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 SATB1Q01826 763 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 PPP3CAQ08209 521 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 Q6ZS52 159 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 DGLUCYQ7Z3D6 616 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 NUP93Q8N1F7 819 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 SPEM1Q8N4L4 309 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 CPA6Q8N4T0 437 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 TAS1R2Q8TE23 839 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 SMARCE1Q969G3 411 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 TSG101Q99816 390 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 TTLL2Q9BWV7 592 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 PRMT8Q9NR22 394 aaPredicted RBP20.47■□□□□ 0.87
CAPN1-211ENST00000527739 HOOK1Q9UJC3 728 aaKnown RBP20.47■□□□□ 0.87
CAPN1-211ENST00000527739 F5P12259 2224 aa20.47■□□□□ 0.87
CAPN1-211ENST00000527739 OTOL1A6NHN0 477 aaPredicted RBP20.46■□□□□ 0.87
CAPN1-211ENST00000527739 RTN3O95197 1032 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms