RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 NHLH1Q02575 133 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 CBWD6Q4V339 395 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 WDR44Q5JSH3 913 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 CBWD3Q5JTY5 395 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 CBWD5Q5RIA9 395 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 ZNF852Q6ZMS4 543 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 FUKQ8N0W3 1084 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 DTWD2Q8NBA8 298 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 SLC35C1Q96A29 364 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 SMARCD1Q96GM5 515 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 NELL2Q99435 816 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 NT5C1AQ9BXI3 368 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 DNAI2Q9GZS0 605 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 KIF9Q9HAQ2 790 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 TDP1Q9NUW8 608 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 CTNND2Q9UQB3 1225 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 COQ4Q9Y3A0 265 aa28■■■□□ 2.07
TSPAN4-217ENST00000527644 CACNA1HO95180 2353 aa27.99■■■□□ 2.07
TSPAN4-217ENST00000527644 MAN2B1O00754 1011 aa27.99■■■□□ 2.07
TSPAN4-217ENST00000527644 GLULP15104 373 aa27.99■■■□□ 2.07
TSPAN4-217ENST00000527644 PPP3CCP48454 512 aa27.99■■■□□ 2.07
TSPAN4-217ENST00000527644 MLLT6P55198 1093 aaPredicted RBP27.99■■■□□ 2.07
TSPAN4-217ENST00000527644 PLCB2Q00722 1185 aa27.99■■■□□ 2.07
TSPAN4-217ENST00000527644 PAK1Q13153 545 aa27.99■■■□□ 2.07
TSPAN4-217ENST00000527644 ORC1Q13415 861 aa27.99■■■□□ 2.07
TSPAN4-217ENST00000527644 ZNF268Q14587 947 aaPredicted RBP27.99■■■□□ 2.07
TSPAN4-217ENST00000527644 CSGALNACT1Q8TDX6 532 aa27.99■■■□□ 2.07
TSPAN4-217ENST00000527644 USP13Q92995 863 aaPredicted RBP27.99■■■□□ 2.07
TSPAN4-217ENST00000527644 LTB4R2Q9NPC1 389 aa27.99■■■□□ 2.07
TSPAN4-217ENST00000527644 THG1LQ9NWX6 298 aaKnown RBP27.99■■■□□ 2.07
TSPAN4-217ENST00000527644 TRPM5Q9NZQ8 1165 aa27.99■■■□□ 2.07
TSPAN4-217ENST00000527644 MRPS17Q9Y2R5 130 aaKnown RBP27.99■■■□□ 2.07
TSPAN4-217ENST00000527644 TRAV19A0A0A6YYK7 116 aa27.98■■■□□ 2.07
TSPAN4-217ENST00000527644 CILPO75339 1184 aa27.98■■■□□ 2.07
TSPAN4-217ENST00000527644 DCNP07585 359 aaKnown RBP27.98■■■□□ 2.07
TSPAN4-217ENST00000527644 CD72P21854 359 aa27.98■■■□□ 2.07
TSPAN4-217ENST00000527644 UBXN2BQ14CS0 331 aa27.98■■■□□ 2.07
TSPAN4-217ENST00000527644 CCDC40Q4G0X9 1142 aa27.98■■■□□ 2.07
TSPAN4-217ENST00000527644 NUP93Q8N1F7 819 aa27.98■■■□□ 2.07
TSPAN4-217ENST00000527644 TTC39CQ8N584 583 aa27.98■■■□□ 2.07
TSPAN4-217ENST00000527644 SLC2A14Q8TDB8 520 aa27.98■■■□□ 2.07
TSPAN4-217ENST00000527644 TWNKQ96RR1 684 aa27.98■■■□□ 2.07
TSPAN4-217ENST00000527644 KCNK16Q96T55 309 aa27.98■■■□□ 2.07
TSPAN4-217ENST00000527644 FAM124BQ9H5Z6 455 aaPredicted RBP27.98■■■□□ 2.07
TSPAN4-217ENST00000527644 TRPC7Q9HCX4 862 aa27.98■■■□□ 2.07
TSPAN4-217ENST00000527644 DMAP1Q9NPF5 467 aaPredicted RBP27.98■■■□□ 2.07
TSPAN4-217ENST00000527644 DLGAP2Q9P1A6 1054 aa27.98■■■□□ 2.07
TSPAN4-217ENST00000527644 CCL26Q9Y258 94 aa27.98■■■□□ 2.07
TSPAN4-217ENST00000527644 FAM170BA6NMN3 283 aa27.97■■■□□ 2.07
TSPAN4-217ENST00000527644 AP1G2O75843 785 aa27.97■■■□□ 2.07
TSPAN4-217ENST00000527644 RTN3O95197 1032 aaPredicted RBP27.97■■■□□ 2.07
TSPAN4-217ENST00000527644 USP17L7P0C7H9 530 aa27.97■■■□□ 2.07
TSPAN4-217ENST00000527644 PFKLP17858 780 aa27.97■■■□□ 2.07
TSPAN4-217ENST00000527644 CD58P19256 250 aa27.97■■■□□ 2.07
TSPAN4-217ENST00000527644 PDE6CP51160 858 aa27.97■■■□□ 2.07
TSPAN4-217ENST00000527644 C12orf29Q8N999 325 aa27.97■■■□□ 2.07
TSPAN4-217ENST00000527644 WHAMMQ8TF30 809 aa27.97■■■□□ 2.07
TSPAN4-217ENST00000527644 GCNT4Q9P109 453 aa27.97■■■□□ 2.07
TSPAN4-217ENST00000527644 MTF2Q9Y483 593 aaPredicted RBP27.97■■■□□ 2.07
TSPAN4-217ENST00000527644 PIAS3Q9Y6X2 628 aa27.97■■■□□ 2.07
TSPAN4-217ENST00000527644 GNA14O95837 355 aa27.96■■■□□ 2.07
TSPAN4-217ENST00000527644 CCDC130P13994 396 aa27.96■■■□□ 2.07
TSPAN4-217ENST00000527644 STX17P56962 302 aa27.96■■■□□ 2.07
TSPAN4-217ENST00000527644 MSANTD3Q96H12 275 aa27.96■■■□□ 2.07
TSPAN4-217ENST00000527644 SLITRK1Q96PX8 696 aa27.96■■■□□ 2.07
TSPAN4-217ENST00000527644 CYP2S1Q96SQ9 504 aa27.96■■■□□ 2.07
TSPAN4-217ENST00000527644 HNRNPABQ99729 332 aaKnown RBP27.96■■■□□ 2.07
TSPAN4-217ENST00000527644 KRT82Q9NSB4 513 aa27.96■■■□□ 2.07
TSPAN4-217ENST00000527644 FAM49BQ9NUQ9 324 aa27.96■■■□□ 2.07
TSPAN4-217ENST00000527644 COL4A3Q01955 1670 aa27.96■■■□□ 2.07
TSPAN4-217ENST00000527644 F5P12259 2224 aa27.96■■■□□ 2.07
TSPAN4-217ENST00000527644 ZNF638Q14966 1978 aaKnown RBP27.95■■■□□ 2.07
TSPAN4-217ENST00000527644 TICRRQ7Z2Z1 1910 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 C2orf78A6NCI8 922 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 ZNF840PA6NDX5 716 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 SHISA7A6NL88 538 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 H0Y858 1186 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 PMM2O15305 246 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 NCAM2O15394 837 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 CKMP06732 381 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 YWHAQP27348 245 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 TAF10Q12962 218 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 ARL14EPQ8N8R7 260 aaPredicted RBP27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 TATDN2Q93075 761 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 CYFIP2Q96F07 1278 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 ZFYVE19Q96K21 471 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 SLC22A12Q96S37 553 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 CLSTN2Q9H4D0 955 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 C8orf33Q9H7E9 229 aaPredicted RBP27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 CSNK1G1Q9HCP0 422 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 COMMD8Q9NX08 183 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 COL4A2P08572 1712 aa27.95■■■□□ 2.06
TSPAN4-217ENST00000527644 TNFRSF10BO14763 440 aa27.94■■■□□ 2.06
TSPAN4-217ENST00000527644 HDCP19113 662 aa27.94■■■□□ 2.06
TSPAN4-217ENST00000527644 TARSP26639 723 aaKnown RBP27.94■■■□□ 2.06
TSPAN4-217ENST00000527644 FMO5P49326 533 aa27.94■■■□□ 2.06
TSPAN4-217ENST00000527644 C1orf228Q6PIY5 440 aa27.94■■■□□ 2.06
TSPAN4-217ENST00000527644 OVCA2Q8WZ82 227 aa27.94■■■□□ 2.06
TSPAN4-217ENST00000527644 FAM3CQ92520 227 aa27.94■■■□□ 2.06
TSPAN4-217ENST00000527644 SMOQ99835 787 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms