RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 LRRIQ3A6PVS8 624 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-207ENST00000527189 A8MXQ7 604 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 NR3C1P04150 777 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 TDGF1P13385 188 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 P4HA1P13674 534 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 CASP4P49662 377 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 ENPEPQ07075 957 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 TNK2Q07912 1038 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 BIRC3Q13489 604 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 NCOA4Q13772 614 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 CCINQ13939 588 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 KCNB1Q14721 858 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 CCDC142Q17RM4 750 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 SGSM1Q2NKQ1 1148 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 ZNF667Q5HYK9 610 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 MDH1BQ5I0G3 518 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 TDRD10Q5VZ19 366 aaKnown RBP14.28□□□□□ -0.12
CAPN1-207ENST00000527189 TXNDC11Q6PKC3 985 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 KRBA2Q6ZNG9 492 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 B3GALNT2Q8NCR0 500 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 PLEKHO2Q8TD55 490 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 EPC1Q9H2F5 836 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 TRPM5Q9NZQ8 1165 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 GCNT4Q9P109 453 aa14.28□□□□□ -0.12
CAPN1-207ENST00000527189 TRDMT1O14717 391 aaKnown RBP14.27□□□□□ -0.13
CAPN1-207ENST00000527189 CKMP06732 381 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 HDCP19113 662 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 HOXA6P31267 233 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 DPYDQ12882 1025 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 GAS6Q14393 721 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 MTF1Q14872 753 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 PON2Q15165 354 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 ZNF699Q32M78 642 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 ZACNQ401N2 412 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 TSSK4Q6SA08 328 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 DGLUCYQ7Z3D6 616 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 GUF1Q8N442 669 aaKnown RBP14.27□□□□□ -0.13
CAPN1-207ENST00000527189 GPR161Q8N6U8 529 aaKnown RBP14.27□□□□□ -0.13
CAPN1-207ENST00000527189 STKLD1Q8NE28 680 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 TTC8Q8TAM2 541 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 OSCP1Q8WVF1 389 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 SECISBP2LQ93073 1101 aaKnown RBP14.27□□□□□ -0.13
CAPN1-207ENST00000527189 TNIP3Q96KP6 325 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 CYP2S1Q96SQ9 504 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 HPS4Q9NQG7 708 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 ARHGAP26Q9UNA1 814 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 NME7Q9Y5B8 376 aa14.27□□□□□ -0.13
CAPN1-207ENST00000527189 PKD1L2Q7Z442 2459 aa14.26□□□□□ -0.13
CAPN1-207ENST00000527189 ATP8B3O60423 1300 aa14.26□□□□□ -0.13
CAPN1-207ENST00000527189 F8VP50 259 aa14.26□□□□□ -0.13
CAPN1-207ENST00000527189 ATG13O75143 517 aa14.26□□□□□ -0.13
CAPN1-207ENST00000527189 ZNF202O95125 648 aa14.26□□□□□ -0.13
CAPN1-207ENST00000527189 VNN1O95497 513 aa14.26□□□□□ -0.13
CAPN1-207ENST00000527189 RPL13P26373 211 aaKnown RBP14.26□□□□□ -0.13
CAPN1-207ENST00000527189 CNR2P34972 360 aa14.26□□□□□ -0.13
CAPN1-207ENST00000527189 GRSF1Q12849 480 aaKnown RBP eCLIP14.26□□□□□ -0.13
CAPN1-207ENST00000527189 NR1H3Q13133 447 aa14.26□□□□□ -0.13
CAPN1-207ENST00000527189 ZNF77Q15935 545 aa14.26□□□□□ -0.13
CAPN1-207ENST00000527189 TMEM196Q5HYL7 178 aa14.26□□□□□ -0.13
CAPN1-207ENST00000527189 INTS8Q75QN2 995 aaKnown RBP14.26□□□□□ -0.13
CAPN1-207ENST00000527189 SV2AQ7L0J3 742 aa14.26□□□□□ -0.13
CAPN1-207ENST00000527189 CPA6Q8N4T0 437 aa14.26□□□□□ -0.13
CAPN1-207ENST00000527189 ARL14EPQ8N8R7 260 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-207ENST00000527189 ATP2A3Q93084 1043 aa14.26□□□□□ -0.13
CAPN1-207ENST00000527189 EBF3Q9H4W6 596 aa14.26□□□□□ -0.13
CAPN1-207ENST00000527189 TRPC7Q9HCX4 862 aa14.26□□□□□ -0.13
CAPN1-207ENST00000527189 RBM12Q9NTZ6 932 aaKnown RBP14.26□□□□□ -0.13
CAPN1-207ENST00000527189 DUS2Q9NX74 493 aaKnown RBP14.26□□□□□ -0.13
CAPN1-207ENST00000527189 ANKRD11Q6UB99 2663 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-207ENST00000527189 C2orf78A6NCI8 922 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 ZNF840PA6NDX5 716 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 OTOL1A6NHN0 477 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-207ENST00000527189 RTN3O95197 1032 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-207ENST00000527189 DRD1P21728 446 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 VAMP7P51809 220 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 MCCD1P59942 119 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-207ENST00000527189 USP46P62068 366 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 DLG4P78352 724 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 SATB1Q01826 763 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 USP4Q13107 963 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 BECN1Q14457 450 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 FBXO43Q4G163 708 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 WDR44Q5JSH3 913 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 CEP135Q66GS9 1140 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 TRIM68Q6AZZ1 485 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 UNC93AQ86WB7 457 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 NUP93Q8N1F7 819 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 CRYBG2Q8N1P7 616 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 PDZD8Q8NEN9 1154 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 OVCA2Q8WZ82 227 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 CHAMP1Q96JM3 812 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 SLITRK1Q96PX8 696 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 SLC22A12Q96S37 553 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 B3GNT5Q9BYG0 378 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 DPEP3Q9H4B8 488 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 ECT2Q9H8V3 914 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 COMMD8Q9NX08 183 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 ZNF638Q14966 1978 aaKnown RBP14.25□□□□□ -0.13
CAPN1-207ENST00000527189 OBSL1O75147 1896 aa14.25□□□□□ -0.13
CAPN1-207ENST00000527189 KIF26AQ9ULI4 1882 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms