RNA–Protein interactions for RNA: ENST00000526001.1

CSF1-208, Transcript of colony stimulating factor 1, human

TSL 4

Gene CSF1, Length 573 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSF1-208	ENST00000526001	TMC2	Q8TDI7	906 aa		13.3	□□□□□ -0.28
CSF1-208	ENST00000526001	ATRIP	Q8WXE1	791 aa		13.3	□□□□□ -0.28
CSF1-208	ENST00000526001	CCDC47	Q96A33	483 aa	Known RBP	13.3	□□□□□ -0.28
CSF1-208	ENST00000526001	C8orf48	Q96LL4	319 aa		13.3	□□□□□ -0.28
CSF1-208	ENST00000526001	IER2	Q9BTL4	223 aa		13.3	□□□□□ -0.28
CSF1-208	ENST00000526001	TTLL2	Q9BWV7	592 aa		13.3	□□□□□ -0.28
CSF1-208	ENST00000526001	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.3	□□□□□ -0.28	4e-6	■■■■■ 72.1
CSF1-208	ENST00000526001	WNT6	Q9Y6F9	365 aa		13.3	□□□□□ -0.28
CSF1-208	ENST00000526001	DENND4C	Q5VZ89	1909 aa		13.3	□□□□□ -0.28
CSF1-208	ENST00000526001	AKAP3	O75969	853 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	TRIM49	P0CI25	452 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	TRIM49C	P0CI26	452 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	HDC	P19113	662 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	CXCL12	P48061	93 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	VAMP7	P51809	220 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	NOP14	P78316	857 aa	Known RBP	13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	IFRD2	Q12894	506 aa	Predicted RBP	13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	ORC1	Q13415	861 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	CCIN	Q13939	588 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	KCNB1	Q14721	858 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	DGKK	Q5KSL6	1271 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	FSTL4	Q6MZW2	842 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	PAQR9	Q6ZVX9	377 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	SPEM1	Q8N4L4	309 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	SH3RF2	Q8TEC5	729 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	CEP295NL	Q96MC4	621 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	KCNK16	Q96T55	309 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	ELOVL4	Q9GZR5	314 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	DUS2	Q9NX74	493 aa	Known RBP	13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	TRPM5	Q9NZQ8	1165 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	HMGXB4	Q9UGU5	601 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	FRMD4B	Q9Y2L6	1034 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	FANCM	Q8IYD8	2048 aa		13.29	□□□□□ -0.28
CSF1-208	ENST00000526001	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	ZNF840P	A6NDX5	716 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001		K7ESF4	209 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	KIF20A	O95235	890 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	HLA-DRA	P01903	254 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	NR2F2	P24468	414 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	PIK3CA	P42336	1068 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	PPP3CA	Q08209	521 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	TAF10	Q12962	218 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	PNOC	Q13519	176 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	PDGFRL	Q15198	375 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	NFIL3	Q16649	462 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	SGSM1	Q2NKQ1	1148 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	ZCWPW2	Q504Y3	356 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	TMEM196	Q5HYL7	178 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	PKN3	Q6P5Z2	889 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	ACOT1	Q86TX2	421 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	FAM35A	Q86V20	835 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	KIAA2013	Q8IYS2	634 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	GUF1	Q8N442	669 aa	Known RBP	13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	OSCP1	Q8WVF1	389 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	RUBCN	Q92622	972 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	HINFP	Q9BQA5	517 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	MED10	Q9BTT4	135 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	RNF38	Q9H0F5	515 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	LINC00597	Q9H2U6	94 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	ECT2	Q9H8V3	914 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	APOBEC3G	Q9HC16	384 aa	Known RBP	13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	ARHGAP26	Q9UNA1	814 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	F5	P12259	2224 aa		13.28	□□□□□ -0.28
CSF1-208	ENST00000526001	PTPRD	P23468	1912 aa		13.27	□□□□□ -0.28
CSF1-208	ENST00000526001	GREB1	Q4ZG55	1949 aa		13.27	□□□□□ -0.28
CSF1-208	ENST00000526001	DMD	P11532	3685 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	CHURC1-FNTB	B4DL54	471 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	LEFTY2	O00292	366 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	TRDMT1	O14717	391 aa	Known RBP	13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	IKBKB	O14920	756 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	MAPK13	O15264	365 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	ABL1	P00519	1130 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	ASS1	P00966	412 aa	Known RBP	13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	EGF	P01133	1207 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	CCDC130	P13994	396 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	GJA4	P35212	333 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	ASPA	P45381	313 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	GCLM	P48507	274 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	IFNAR2	P48551	515 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	FNTB	P49356	437 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	GALK1	P51570	392 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	NDST1	P52848	882 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	SRSF5	Q13243	272 aa	Known RBP	13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	ADAM9	Q13443	819 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	EML3	Q32P44	896 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	FAM186B	Q8IYM0	893 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	FUK	Q8N0W3	1084 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	SCAMP5	Q8TAC9	235 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	TAS1R2	Q8TE23	839 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	EEF2KMT	Q96G04	330 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	EPC1	Q9H2F5	836 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	MMRN2	Q9H8L6	949 aa		13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	SMG5	Q9UPR3	1016 aa	Known RBP	13.27	□□□□□ -0.29
CSF1-208	ENST00000526001	SCAMP3	O14828	347 aa	Known RBP	13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms