RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 ST3GAL1Q11201 340 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 PCOLCEQ15113 449 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 PPP2R5BQ15173 497 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 LRRC41Q15345 812 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 ME3Q16798 604 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 LY6KQ17RY6 165 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 NRN1LQ496H8 165 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 USP39Q53GS9 565 aaKnown RBP5.86□□□□□ -1.47
SVIP-202ENST00000525670 MIIPQ5JXC2 388 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 TMEM200BQ69YZ2 307 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 MAMDC4Q6UXC1 1216 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 OVCH1Q7RTY7 1134 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 TLK2Q86UE8 772 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 TMTC2Q8N394 836 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 OR6J1Q8NGC5 347 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 CFHR4Q92496 578 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 DLG3Q92796 817 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 CUL5Q93034 780 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 MTMR8Q96EF0 704 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 GBP4Q96PP9 640 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 OR14A2Q96R54 314 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 DNAJC7Q99615 494 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 SENP6Q9GZR1 1112 aaPredicted RBP5.86□□□□□ -1.47
SVIP-202ENST00000525670 PCED1AQ9H1Q7 454 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 OR10A2Q9H208 303 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 SLKQ9H2G2 1235 aaPredicted RBP5.86□□□□□ -1.47
SVIP-202ENST00000525670 C11orf49Q9H6J7 331 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 UPF2Q9HAU5 1272 aaKnown RBP5.86□□□□□ -1.47
SVIP-202ENST00000525670 PXMP2Q9NR77 195 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 SNTG2Q9NY99 539 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 ADD3Q9UEY8 706 aaKnown RBP5.86□□□□□ -1.47
SVIP-202ENST00000525670 KCNJ14Q9UNX9 436 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 ATP11BQ9Y2G3 1177 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 COQ6Q9Y2Z9 468 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 ASB1Q9Y576 335 aa5.86□□□□□ -1.47
SVIP-202ENST00000525670 RANBP2P49792 3224 aaKnown RBP5.86□□□□□ -1.47
SVIP-202ENST00000525670 NID2Q14112 1375 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 LAMA2P24043 3122 aaKnown RBP5.85□□□□□ -1.47
SVIP-202ENST00000525670 SMCO2A6NFE2 343 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 ASB14A6NK59 587 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 DDX39AO00148 427 aaKnown RBP5.85□□□□□ -1.47
SVIP-202ENST00000525670 PQBP1O60828 265 aaKnown RBP5.85□□□□□ -1.47
SVIP-202ENST00000525670 SCG2P13521 617 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 CCND2P30279 289 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 SDHAP31040 664 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 MRE11P49959 708 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 HSD17B4P51659 736 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 TNFAIP2Q03169 654 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 PGM5Q15124 567 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 LRRC26Q2I0M4 334 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 TM4SF20Q53R12 229 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 TAPT1Q6NXT6 567 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 CXCL17Q6UXB2 119 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 FILIP1Q7Z7B0 1213 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 HIPK4Q8NE63 616 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 EXTL1Q92935 676 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 ZNF503Q96F45 646 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 SCLYQ96I15 445 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 LZTS2Q9BRK4 669 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 PDCD2LQ9BRP1 358 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 ANO3Q9BYT9 981 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 WDR11Q9BZH6 1224 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 TM6SF1Q9BZW5 370 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 PSTPIP2Q9H939 334 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 FAM184BQ9ULE4 1060 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 B3GALT1Q9Y5Z6 326 aa5.85□□□□□ -1.47
SVIP-202ENST00000525670 SLC12A8A0AV02 714 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 NPIPB8E9PQR5 432 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 GOLGA6L22H0YM25 854 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 MEIS2O14770 477 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 PFKFB2O60825 505 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 CTDNEP1O95476 244 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 GGPS1O95749 300 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 TXNP10599 105 aaKnown RBP5.84□□□□□ -1.47
SVIP-202ENST00000525670 UBA1P22314 1058 aaKnown RBP5.84□□□□□ -1.47
SVIP-202ENST00000525670 NLRP5P59047 1200 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 ANAPC15P60006 121 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 STXBP2Q15833 593 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 FSCN1Q16658 493 aaKnown RBP5.84□□□□□ -1.47
SVIP-202ENST00000525670 PFKFB3Q16875 520 aaPredicted RBP5.84□□□□□ -1.47
SVIP-202ENST00000525670 TRIM60Q495X7 471 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 GRAMD4Q6IC98 578 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 FSTL4Q6MZW2 842 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 NECAB2Q7Z6G3 386 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 ZSWIM2Q8NEG5 633 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 CALML6Q8TD86 181 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 NSUN6Q8TEA1 469 aaKnown RBP5.84□□□□□ -1.47
SVIP-202ENST00000525670 GTF3C6Q969F1 213 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 GJA10Q969M2 543 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 SRPK1Q96SB4 655 aaKnown RBP5.84□□□□□ -1.47
SVIP-202ENST00000525670 MAP3K14Q99558 947 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 MRPL4Q9BYD3 311 aaKnown RBP5.84□□□□□ -1.47
SVIP-202ENST00000525670 AGXT2Q9BYV1 514 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 NELFAQ9H3P2 528 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 ABHD16BQ9H3Z7 469 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 VTA1Q9NP79 307 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 BARHL2Q9NY43 387 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 PLA2G3Q9NZ20 509 aa5.84□□□□□ -1.47
SVIP-202ENST00000525670 ORC3Q9UBD5 711 aaPredicted RBP5.84□□□□□ -1.47
SVIP-202ENST00000525670 SFMBT1Q9UHJ3 866 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms