RNA–Protein interactions for RNA: ENST00000525530.1

PPFIA1-203, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-203ENST00000525530 SPEF2Q9C093 1822 aa5.87□□□□□ -1.47
PPFIA1-203ENST00000525530 FER1L6Q2WGJ9 1857 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 KIAA0391O15091 583 aaKnown RBP5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 ZNF185O15231 689 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 ANP32CO43423 234 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 SLC43A1O75387 559 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 NCR1O76036 304 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 RECQL4O94761 1208 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 TYRP14679 529 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 ZNF37AP17032 561 aaPredicted RBP5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 GCSHP23434 173 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 HMGB2P26583 209 aaKnown RBP5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 PRDX5P30044 214 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 SLC6A4P31645 630 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 CHN2P52757 468 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 KRTAP10-11P60412 298 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 NKX6-1P78426 367 aaPredicted RBP5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 GFOD2Q3B7J2 385 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 BEAN1Q3B7T3 259 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 AGAP9Q5VTM2 703 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 C14orf80Q86SX3 495 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 FAM90A1Q86YD7 464 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 RHOT2Q8IXI1 618 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 ZBTB34Q8NCN2 500 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 LINC00476Q8WZB0 136 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 NEU1Q99519 415 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 JKAMPQ9P055 326 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 FEZ2Q9UHY8 353 aaPredicted RBP5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 ASAP1Q9ULH1 1129 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 PCDHA3Q9Y5H8 950 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 NR2E3Q9Y5X4 410 aa5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 GOLGB1Q14789 3259 aaKnown RBP5.86□□□□□ -1.47
PPFIA1-203ENST00000525530 CTNND1O60716 968 aaKnown RBP5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 TUSC2O75896 110 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 UBXN7O94888 489 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 SLC6A2P23975 617 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 SMARCA1P28370 1054 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 TMPOP42166 694 aaKnown RBP5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 FOXI1Q12951 378 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 GBX1Q14549 363 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 SLC15A2Q16348 729 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 FLYWCH1Q4VC44 716 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 SYCE2Q6PIF2 218 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 ZNF365Q70YC5 407 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 MED25Q71SY5 747 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 OVCH2Q7RTZ1 564 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 WDR75Q8IWA0 830 aaKnown RBP5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 CAMKK1Q8N5S9 505 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 FITM2Q8N6M3 262 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 FAM98AQ8NCA5 519 aaKnown RBP5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 PPP1R35Q8TAP8 253 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 KLHDC4Q8TBB5 520 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 C8orf48Q96LL4 319 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 LRFN3Q9BTN0 628 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 PACSIN1Q9BY11 444 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 GSTO2Q9H4Y5 243 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 AKIP1Q9NQ31 210 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 GNL3LQ9NVN8 582 aaKnown RBP5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 RLIMQ9NVW2 624 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 ABCF2Q9UG63 623 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 EIF2B4Q9UI10 523 aaKnown RBP5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 COX11Q9Y6N1 276 aa5.85□□□□□ -1.47
PPFIA1-203ENST00000525530 PSME4Q14997 1843 aa5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 CDHR4A6H8M9 788 aa5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 VSTM5A8MXK1 200 aa5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 CCER2I3L3R5 266 aa5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 ANXA1P04083 346 aa5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 HTR1BP28222 390 aa5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 RNASE9P60153 205 aaKnown RBP5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 ITPK1Q13572 414 aa5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 WDR43Q15061 677 aaKnown RBP eCLIP5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 GDF7Q7Z4P5 450 aa5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 ADAM2Q99965 735 aa5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 REXO4Q9GZR2 422 aaKnown RBP5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 TMEM60Q9H2L4 133 aa5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 WDR26Q9H7D7 661 aa5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 PNPOQ9NVS9 261 aa5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 BABAM1Q9NWV8 329 aa5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 CCNL1Q9UK58 526 aaPredicted RBP5.84□□□□□ -1.47
PPFIA1-203ENST00000525530 MAPK8IP3Q9UPT6 1336 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 A0A088AWK7 358 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 MARCH11A6NNE9 402 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 FAM227AF5H4B4 570 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 INO80B-WBP1J3KQ70 363 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 MARCH6O60337 910 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 SPATA31D3P0C874 917 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 PIK3CGP48736 1102 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 AGFG1P52594 562 aaKnown RBP5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 TEFQ10587 303 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 PLS1Q14651 629 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 TAF7Q15545 349 aaPredicted RBP5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 ARHGAP29Q52LW3 1261 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 CCDC93Q567U6 631 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 ZKSCAN2Q63HK3 967 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 ZNF790Q6PG37 636 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 SPATA31D4Q6ZUB0 917 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 MCM10Q7L590 875 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 PDSS2Q86YH6 399 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 PLBD2Q8NHP8 589 aa5.83□□□□□ -1.48
PPFIA1-203ENST00000525530 NUP133Q8WUM0 1156 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms