RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 CATSPER4Q7RTX7 472 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 SLFN11Q7Z7L1 901 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 NBPF11Q86T75 865 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 RAB11FIP4Q86YS3 637 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 CLEC10AQ8IUN9 316 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 EPHX4Q8IUS5 362 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 CCDC170Q8IYT3 715 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 TMCO5AQ8N6Q1 288 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 REPS2Q8NFH8 660 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 METTL6Q8TCB7 284 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 LINC01599Q8WXQ3 324 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 ZNF845Q96IR2 970 aaPredicted RBP5.94□□□□□ -1.46
USP47-204ENST00000525078 MAK16Q9BXY0 300 aaKnown RBP5.94□□□□□ -1.46
USP47-204ENST00000525078 CPEB1Q9BZB8 566 aaKnown RBP5.94□□□□□ -1.46
USP47-204ENST00000525078 HAPLN2Q9GZV7 340 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 SMARCAD1Q9H4L7 1026 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 ZBTB26Q9HCK0 441 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 PLA2G3Q9NZ20 509 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 PA2G4Q9UQ80 394 aaKnown RBP5.94□□□□□ -1.46
USP47-204ENST00000525078 KNSTRNQ9Y448 316 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 FLT1P17948 1338 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 PNMA6EA0A0J9YXQ4 647 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 J3KTA2 159 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 PEX12O00623 359 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 CPLX1O14810 134 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 TEX33O43247 280 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 DYRK3O43781 588 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 DNAJB5O75953 348 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 CCNDBP1O95273 360 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 SLU7O95391 586 aaKnown RBP5.93□□□□□ -1.46
USP47-204ENST00000525078 IGHDP01880 384 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 LRG1P02750 347 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 FURINP09958 794 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 GAAP10253 952 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 MST1P26927 711 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 GUCY1A2P33402 732 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 THBS2P35442 1172 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 HNF4AP41235 474 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 UBXN2AP68543 259 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 AIMP1Q12904 312 aaKnown RBP5.93□□□□□ -1.46
USP47-204ENST00000525078 CAMK1Q14012 370 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 KIR3DS1Q14943 382 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 INSCQ1MX18 579 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 ZNF362Q5T0B9 420 aaPredicted RBP5.93□□□□□ -1.46
USP47-204ENST00000525078 KAZNQ674X7 775 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 GRAMD4Q6IC98 578 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 SYNE3Q6ZMZ3 975 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 RASGRP2Q7LDG7 609 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 TAS1R1Q7RTX1 841 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 GALNT4Q8N4A0 578 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 AOPEPQ8N6M6 819 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 TEX9Q8N6V9 391 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 ANKRD44Q8N8A2 993 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 NFKBIDQ8NI38 313 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 CASKIN2Q8WXE0 1202 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 LENG1Q96BZ8 264 aaPredicted RBP5.93□□□□□ -1.46
USP47-204ENST00000525078 RBM17Q96I25 401 aaKnown RBP5.93□□□□□ -1.46
USP47-204ENST00000525078 FAM83CQ9BQN1 747 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 FUZQ9BT04 418 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 METTL22Q9BUU2 404 aaPredicted RBP5.93□□□□□ -1.46
USP47-204ENST00000525078 LRRC4CQ9HCJ2 640 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 PDRG1Q9NUG6 133 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 HCFC1R1Q9NWW0 138 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 GPRC5DQ9NZD1 345 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 RBPJLQ9UBG7 517 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 XPR1Q9UBH6 696 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 MORF4L1Q9UBU8 362 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 RGS17Q9UGC6 210 aaPredicted RBP5.93□□□□□ -1.46
USP47-204ENST00000525078 PITPNM2Q9BZ72 1349 aa5.93□□□□□ -1.46
USP47-204ENST00000525078 ZC3H12DA2A288 527 aaKnown RBP5.92□□□□□ -1.46
USP47-204ENST00000525078 ZNF785A8K8V0 405 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 A8MV72 311 aaPredicted RBP5.92□□□□□ -1.46
USP47-204ENST00000525078 M0QYG6 137 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 PIK3R2O00459 728 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 UBE2CO00762 179 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 SH2B2O14492 632 aaPredicted RBP5.92□□□□□ -1.46
USP47-204ENST00000525078 N4BP3O15049 544 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 ITGA10O75578 1167 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 MT-ND3P03897 115 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 ATP5BP06576 529 aaKnown RBP5.92□□□□□ -1.46
USP47-204ENST00000525078 SPARCP09486 303 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 SBK3P0C264 359 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 RAP2AP10114 183 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 HOXB4P17483 251 aaPredicted RBP5.92□□□□□ -1.46
USP47-204ENST00000525078 EEF1DP29692 281 aaKnown RBP5.92□□□□□ -1.46
USP47-204ENST00000525078 HPDP32754 393 aaPredicted RBP5.92□□□□□ -1.46
USP47-204ENST00000525078 CRHR1P34998 444 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 RGS2P41220 211 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 PTDSS1P48651 473 aaKnown RBP5.92□□□□□ -1.46
USP47-204ENST00000525078 IL13RA1P78552 427 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 BFSP1Q12934 665 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 GRM4Q14833 912 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 PTPN14Q15678 1187 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 TBCCQ15814 346 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 MMEL1Q495T6 779 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 GALNTL6Q49A17 601 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 DEPDC1Q5TB30 811 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 TEPPQ6URK8 271 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 CYP20A1Q6UW02 462 aa5.92□□□□□ -1.46
USP47-204ENST00000525078 KRTAP1-3Q8IUG1 177 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms