RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PSMC2P35998 433 aaKnown RBP19.75■□□□□ 0.75
CAPN1-203ENST00000525013 GCLMP48507 274 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 FAM160A1Q05DH4 1040 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 TXNDC11Q6PKC3 985 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 ARL14EPQ8N8R7 260 aaPredicted RBP19.75■□□□□ 0.75
CAPN1-203ENST00000525013 TAF4BQ92750 862 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 TNIP3Q96KP6 325 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 C8orf48Q96LL4 319 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 MED10Q9BTT4 135 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 SDCBP2Q9H190 292 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 CHRDQ9H2X0 955 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 EBF3Q9H4W6 596 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 MMRN2Q9H8L6 949 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 TRPM5Q9NZQ8 1165 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 CFAP54Q96N23 3096 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 GVINP1Q7Z2Y8 2422 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 ATP8B3O60423 1300 aa19.75■□□□□ 0.75
CAPN1-203ENST00000525013 SPTBN4Q9H254 2564 aa19.74■□□□□ 0.75
CAPN1-203ENST00000525013 SMC2O95347 1197 aa19.74■□□□□ 0.75
CAPN1-203ENST00000525013 ABL1P00519 1130 aa19.74■□□□□ 0.75
CAPN1-203ENST00000525013 CHRNB1P11230 501 aa19.74■□□□□ 0.75
CAPN1-203ENST00000525013 HDCP19113 662 aa19.74■□□□□ 0.75
CAPN1-203ENST00000525013 CACNA2D1P54289 1103 aa19.74■□□□□ 0.75
CAPN1-203ENST00000525013 IFRD2Q12894 506 aaPredicted RBP19.74■□□□□ 0.75
CAPN1-203ENST00000525013 LRRC32Q14392 662 aa19.74■□□□□ 0.75
CAPN1-203ENST00000525013 ZNF268Q14587 947 aaPredicted RBP19.74■□□□□ 0.75
CAPN1-203ENST00000525013 TRIM68Q6AZZ1 485 aa19.74■□□□□ 0.75
CAPN1-203ENST00000525013 SPOPLQ6IQ16 392 aa19.74■□□□□ 0.75
CAPN1-203ENST00000525013 ACOT1Q86TX2 421 aa19.74■□□□□ 0.75
CAPN1-203ENST00000525013 EEF2KMTQ96G04 330 aa19.74■□□□□ 0.75
CAPN1-203ENST00000525013 FAM83CQ9BQN1 747 aa19.74■□□□□ 0.75
CAPN1-203ENST00000525013 IMPG2Q9BZV3 1241 aa19.74■□□□□ 0.75
CAPN1-203ENST00000525013 SEMA4AQ9H3S1 761 aa19.74■□□□□ 0.75
CAPN1-203ENST00000525013 HELZP42694 1942 aaKnown RBP19.73■□□□□ 0.75
CAPN1-203ENST00000525013 ASS1P00966 412 aaKnown RBP19.73■□□□□ 0.75
CAPN1-203ENST00000525013 NOP14P78316 857 aaKnown RBP19.73■□□□□ 0.75
CAPN1-203ENST00000525013 ORC1Q13415 861 aa19.73■□□□□ 0.75
CAPN1-203ENST00000525013 RUNX3Q13761 415 aa19.73■□□□□ 0.75
CAPN1-203ENST00000525013 PON2Q15165 354 aa19.73■□□□□ 0.75
CAPN1-203ENST00000525013 ZNF528Q3MIS6 628 aa19.73■□□□□ 0.75
CAPN1-203ENST00000525013 ZCWPW2Q504Y3 356 aa19.73■□□□□ 0.75
CAPN1-203ENST00000525013 TSSK4Q6SA08 328 aa19.73■□□□□ 0.75
CAPN1-203ENST00000525013 ENGASEQ8NFI3 743 aa19.73■□□□□ 0.75
CAPN1-203ENST00000525013 ERCC4Q92889 916 aaPredicted RBP19.73■□□□□ 0.75
CAPN1-203ENST00000525013 TTLL2Q9BWV7 592 aa19.73■□□□□ 0.75
CAPN1-203ENST00000525013 RBM12Q9NTZ6 932 aaKnown RBP19.73■□□□□ 0.75
CAPN1-203ENST00000525013 TMEM30AQ9NV96 361 aa19.73■□□□□ 0.75
CAPN1-203ENST00000525013 HOOK1Q9UJC3 728 aaKnown RBP19.73■□□□□ 0.75
CAPN1-203ENST00000525013 LMNAP02545 664 aaKnown RBP19.72■□□□□ 0.75
CAPN1-203ENST00000525013 ARSAP15289 507 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 PRCPP42785 496 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 PDE6CP51160 858 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 NDST1P52848 882 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 PPP3CAQ08209 521 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 MTF1Q14872 753 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 EDRF1Q3B7T1 1238 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 FAM35AQ86V20 835 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 ADSSL1Q8N142 457 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 RIN3Q8TB24 985 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 TAS1R2Q8TE23 839 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 ATRIPQ8WXE1 791 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 SMARCE1Q969G3 411 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 SLITRK1Q96PX8 696 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 GSDMAQ96QA5 445 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 IER2Q9BTL4 223 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 HPS4Q9NQG7 708 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 GCNT4Q9P109 453 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 ZNF292O60281 2723 aa19.72■□□□□ 0.75
CAPN1-203ENST00000525013 DMDP11532 3685 aa19.71■□□□□ 0.75
CAPN1-203ENST00000525013 CETN3O15182 167 aa19.71■□□□□ 0.75
CAPN1-203ENST00000525013 KINO60870 393 aaKnown RBP19.71■□□□□ 0.75
CAPN1-203ENST00000525013 EPB41P11171 864 aaKnown RBP19.71■□□□□ 0.75
CAPN1-203ENST00000525013 ASPAP45381 313 aa19.71■□□□□ 0.75
CAPN1-203ENST00000525013 TAF10Q12962 218 aa19.71■□□□□ 0.75
CAPN1-203ENST00000525013 PPP2R5DQ14738 602 aa19.71■□□□□ 0.75
CAPN1-203ENST00000525013 PDGFRLQ15198 375 aa19.71■□□□□ 0.75
CAPN1-203ENST00000525013 DGKKQ5KSL6 1271 aa19.71■□□□□ 0.75
CAPN1-203ENST00000525013 ZNF658Q5TYW1 1059 aaPredicted RBP19.71■□□□□ 0.75
CAPN1-203ENST00000525013 NUP93Q8N1F7 819 aa19.71■□□□□ 0.75
CAPN1-203ENST00000525013 CCDC150Q8NCX0 1101 aa19.71■□□□□ 0.75
CAPN1-203ENST00000525013 SH3RF2Q8TEC5 729 aa19.71■□□□□ 0.75
CAPN1-203ENST00000525013 SMARCD1Q96GM5 515 aa19.71■□□□□ 0.75
CAPN1-203ENST00000525013 KCNK16Q96T55 309 aa19.71■□□□□ 0.75
CAPN1-203ENST00000525013 TSG101Q99816 390 aa19.71■□□□□ 0.75
CAPN1-203ENST00000525013 PRMT8Q9NR22 394 aaPredicted RBP19.71■□□□□ 0.75
CAPN1-203ENST00000525013 KRT82Q9NSB4 513 aa19.71■□□□□ 0.75
CAPN1-203ENST00000525013 DUS2Q9NX74 493 aaKnown RBP19.71■□□□□ 0.75
CAPN1-203ENST00000525013 HMGXB4Q9UGU5 601 aa19.71■□□□□ 0.75
CAPN1-203ENST00000525013 PCDHA5Q9Y5H7 936 aa19.71■□□□□ 0.75
CAPN1-203ENST00000525013 OTOGLQ3ZCN5 2332 aa19.7■□□□□ 0.74
CAPN1-203ENST00000525013 GPR179Q6PRD1 2367 aa19.7■□□□□ 0.74
CAPN1-203ENST00000525013 ZNF840PA6NDX5 716 aa19.7■□□□□ 0.74
CAPN1-203ENST00000525013 OTOL1A6NHN0 477 aaPredicted RBP19.7■□□□□ 0.74
CAPN1-203ENST00000525013 AP1G2O75843 785 aa19.7■□□□□ 0.74
CAPN1-203ENST00000525013 RTN3O95197 1032 aaPredicted RBP19.7■□□□□ 0.74
CAPN1-203ENST00000525013 CCDC130P13994 396 aa19.7■□□□□ 0.74
CAPN1-203ENST00000525013 TRIM21P19474 475 aaKnown RBP19.7■□□□□ 0.74
CAPN1-203ENST00000525013 YWHAQP27348 245 aa19.7■□□□□ 0.74
CAPN1-203ENST00000525013 PPP3CCP48454 512 aa19.7■□□□□ 0.74
CAPN1-203ENST00000525013 IFNAR2P48551 515 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms