RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 TNNC1P63316 161 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 KRT17Q04695 432 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 TRPC3Q13507 836 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 STILQ15468 1287 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 TEX35Q5T0J7 233 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 PTCRAQ6ISU1 281 aaPredicted RBP7.5□□□□□ -1.21
VPS11-201ENST00000524454 ACAD10Q6JQN1 1059 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 FBXO38Q6PIJ6 1188 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 TMCO3Q6UWJ1 677 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 TAS1R1Q7RTX1 841 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 TMC7Q7Z402 723 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 PEX26Q7Z412 305 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 NT5DC3Q86UY8 548 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 PHF13Q86YI8 300 aaPredicted RBP7.5□□□□□ -1.21
VPS11-201ENST00000524454 COLGALT2Q8IYK4 626 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 VPS52Q8N1B4 723 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 GSTCDQ8NEC7 633 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 SPATA4Q8NEY3 305 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 SLC35G2Q8TBE7 412 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 FEZF2Q8TBJ5 459 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 PABPC5Q96DU9 382 aaKnown RBP7.5□□□□□ -1.21
VPS11-201ENST00000524454 TMEM169Q96HH4 297 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 IGSF21Q96ID5 467 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 UHRF1Q96T88 793 aaPredicted RBP7.5□□□□□ -1.21
VPS11-201ENST00000524454 POP1Q99575 1024 aaKnown RBP7.5□□□□□ -1.21
VPS11-201ENST00000524454 PACSIN1Q9BY11 444 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 BCO2Q9BYV7 579 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 DNAI2Q9GZS0 605 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 XYLT2Q9H1B5 865 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 MRPL47Q9HD33 250 aaKnown RBP7.5□□□□□ -1.21
VPS11-201ENST00000524454 ARFGAP3Q9NP61 516 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 TOPORSQ9NS56 1045 aaPredicted RBP7.5□□□□□ -1.21
VPS11-201ENST00000524454 MARCH5Q9NX47 278 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 CDH22Q9UJ99 828 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 TMEM59LQ9UK28 342 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 AMFRQ9UKV5 643 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 FAN1Q9Y2M0 1017 aa7.5□□□□□ -1.21
VPS11-201ENST00000524454 ANK1P16157 1881 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 VWA8A3KMH1 1905 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 BRWD1Q9NSI6 2320 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.49□□□□□ -1.21
VPS11-201ENST00000524454 CCDC66A2RUB6 948 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 C2orf71A6NGG8 1288 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 ENC1O14682 589 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 MEFVO15553 781 aaPredicted RBP7.49□□□□□ -1.21
VPS11-201ENST00000524454 CYP26A1O43174 497 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 MED7O43513 233 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 XPOTO43592 962 aaKnown RBP7.49□□□□□ -1.21
VPS11-201ENST00000524454 BUB1O43683 1085 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 BUB1BO60566 1050 aaPredicted RBP7.49□□□□□ -1.21
VPS11-201ENST00000524454 ZRANB2O95218 330 aaKnown RBP eCLIP7.49□□□□□ -1.21
VPS11-201ENST00000524454 CXCL14O95715 111 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 FAM163BP0C2L3 166 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 PNMA6AP0CW24 399 aaPredicted RBP7.49□□□□□ -1.21
VPS11-201ENST00000524454 PAX3P23760 479 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 NOP2P46087 812 aaKnown RBP7.49□□□□□ -1.21
VPS11-201ENST00000524454 NSFP46459 744 aaKnown RBP7.49□□□□□ -1.21
VPS11-201ENST00000524454 FAM193AP78312 1265 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 UBE3AQ05086 875 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 INCA1Q0VD86 236 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 PTP4A2Q12974 167 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 ADAM15Q13444 863 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 SMC1AQ14683 1233 aaKnown RBP7.49□□□□□ -1.21
VPS11-201ENST00000524454 COL19A1Q14993 1142 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 QPCTQ16769 361 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 AAK1Q2M2I8 961 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 CTC1Q2NKJ3 1217 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 ZNF699Q32M78 642 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 LEXMQ3ZCV2 418 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 MSS51Q4VC12 460 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 LIN9Q5TKA1 542 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 DAAM2Q86T65 1068 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 SLC47A2Q86VL8 602 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 EFCAB13Q8IY85 973 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 HACE1Q8IYU2 909 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 LRRC52Q8N7C0 313 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 UBL4BQ8N7F7 174 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 EFHBQ8N7U6 833 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 RBBP8NLQ8NC74 664 aaPredicted RBP7.49□□□□□ -1.21
VPS11-201ENST00000524454 OR5B17Q8NGF7 314 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 KAT5Q92993 513 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 RUNDC3BQ96NL0 473 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 MMS19Q96T76 1030 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 CCDC94Q9BW85 323 aaPredicted RBP7.49□□□□□ -1.21
VPS11-201ENST00000524454 FAM129AQ9BZQ8 928 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 MTMR12Q9C0I1 747 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 MIS12Q9H081 205 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 THAP2Q9H0W7 228 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 ZBP1Q9H171 429 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 LHX5Q9H2C1 402 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 SLITRK6Q9H5Y7 841 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 ANKZF1Q9H8Y5 726 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 VIPAS39Q9H9C1 493 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 GOLGA2P5Q9HBQ8 144 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 CD320Q9NPF0 282 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.49□□□□□ -1.21
VPS11-201ENST00000524454 CLEC1BQ9P126 229 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 PUF60Q9UHX1 559 aaKnown RBP7.49□□□□□ -1.21
VPS11-201ENST00000524454 STRIP2Q9ULQ0 834 aa7.49□□□□□ -1.21
VPS11-201ENST00000524454 TFR2Q9UP52 801 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms