RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, human

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-222	ENST00000524226		M0R3G1	203 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	IRF6	O14896	467 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	STRN	O43815	780 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	RNASEH1	O60930	286 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	AKAP3	O75969	853 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	PARN	O95453	639 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	HNRNPC	P07910	306 aa	Known RBP eCLIP	2.7	□□□□□ -1.98	4e-6	■■□□□ 14.1
PCM1-222	ENST00000524226	KCNA2	P16389	499 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	FECH	P22830	423 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	SERPINB1	P30740	379 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	ICAM3	P32942	547 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	GCLM	P48507	274 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	VEGFB	P49765	207 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	BLVRA	P53004	296 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	ERVK-9	P63128	1117 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	GUCY1A3	Q02108	690 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	RAD51	Q06609	339 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	CYLC2	Q14093	348 aa	Predicted RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	DRAP1	Q14919	205 aa	Predicted RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	UGCG	Q16739	394 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	C11orf88	Q6PI97	169 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	MTHFD1L	Q6UB35	978 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	ENOSF1	Q7L5Y1	443 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	CDKL3	Q8IVW4	592 aa	Predicted RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	ZC3H3	Q8IXZ2	948 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	STKLD1	Q8NE28	680 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	MAML1	Q92585	1016 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	ALKBH8	Q96BT7	664 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	THAP11	Q96EK4	314 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	INPP4A	Q96PE3	977 aa	Predicted RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	PURB	Q96QR8	312 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	KCNK16	Q96T55	309 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	SGIP1	Q9BQI5	828 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	MRPL9	Q9BYD2	267 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	FGFBP2	Q9BYJ0	223 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	L2HGDH	Q9H9P8	463 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	TMEM8A	Q9HCN3	771 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	DDX56	Q9NY93	547 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	PPARGC1A	Q9UBK2	798 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	ZNF229	Q9UJW7	825 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	SH3BP1	Q9Y3L3	701 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	RIPK3	Q9Y572	518 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	MYH7B	A7E2Y1	1941 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	TMEM191C	A6NGB0	347 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	UNCX	A6NJT0	531 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	GPR25	O00155	361 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	CFLAR	O15519	480 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	LRRN2	O75325	713 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	SUPT3H	O75486	399 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	WBP4	O75554	376 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	SLC9A1	P19634	815 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	GART	P22102	1010 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	CASP4	P49662	377 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	NPEPPS	P55786	919 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	FBXW4	P57775	412 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	GTF2B	Q00403	316 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	MTFR1	Q15390	333 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	UGP2	Q16851	508 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	TJAP1	Q5JTD0	557 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	NUGGC	Q68CJ6	796 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	CAPRIN2	Q6IMN6	1127 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	ZNF544	Q6NX49	715 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	TRIM65	Q6PJ69	517 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	LRRC31	Q6UY01	552 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	TRIM72	Q6ZMU5	477 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	ZNF662	Q6ZS27	426 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	ADCK1	Q86TW2	530 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	ERICH1	Q86X53	443 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	SLC9A9	Q8IVB4	645 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	MAP4K3	Q8IVH8	894 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	FAM9C	Q8IZT9	166 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	AGGF1	Q8N302	714 aa	eCLIP	2.7	□□□□□ -1.98	1e-7	■■■□□ 16.9
PCM1-222	ENST00000524226	RNF217	Q8TC41	542 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	TMEM143	Q96AN5	459 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	ZNF556	Q9HAH1	456 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	GPRC5C	Q9NQ84	441 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	ASNSD1	Q9NWL6	643 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	RNF186	Q9NXI6	227 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	NSMCE4A	Q9NXX6	385 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	FBXL5	Q9UKA1	691 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	AGO2	Q9UKV8	859 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	ZNF214	Q9UL59	606 aa	Predicted RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	LOC102724159	A0A0B4J2E5	919 aa		2.69	□□□□□ -1.98
PCM1-222	ENST00000524226	EDIL3	O43854	480 aa		2.69	□□□□□ -1.98
PCM1-222	ENST00000524226	SYNCRIP	O60506	623 aa	Known RBP	2.69	□□□□□ -1.98
PCM1-222	ENST00000524226	PALM	O75781	387 aa		2.69	□□□□□ -1.98
PCM1-222	ENST00000524226	ZRANB2	O95218	330 aa	Known RBP eCLIP	2.69	□□□□□ -1.98
PCM1-222	ENST00000524226	ATP1A1	P05023	1023 aa	Known RBP	2.69	□□□□□ -1.98
PCM1-222	ENST00000524226	PRKCB	P05771	671 aa		2.69	□□□□□ -1.98
PCM1-222	ENST00000524226	PGK2	P07205	417 aa		2.69	□□□□□ -1.98
PCM1-222	ENST00000524226	RALA	P11233	206 aa		2.69	□□□□□ -1.98
PCM1-222	ENST00000524226	PRKAR2A	P13861	404 aa	Known RBP	2.69	□□□□□ -1.98
PCM1-222	ENST00000524226	UBA1	P22314	1058 aa	Known RBP	2.69	□□□□□ -1.98
PCM1-222	ENST00000524226	TBXAS1	P24557	533 aa	Predicted RBP	2.69	□□□□□ -1.98
PCM1-222	ENST00000524226	CHRNA3	P32297	505 aa		2.69	□□□□□ -1.98
PCM1-222	ENST00000524226	SLC26A2	P50443	739 aa		2.69	□□□□□ -1.98
PCM1-222	ENST00000524226	ANXA11	P50995	505 aa	Known RBP	2.69	□□□□□ -1.98
PCM1-222	ENST00000524226	ARFIP2	P53365	341 aa		2.69	□□□□□ -1.98
PCM1-222	ENST00000524226	HIRA	P54198	1017 aa	Predicted RBP	2.69	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 217 ms