RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 JADE3Q92613 823 aa3.48□□□□□ -1.85
PCM1-217ENST00000522998 MAP4K1Q92918 833 aa3.48□□□□□ -1.85
PCM1-217ENST00000522998 CCDC17Q96LX7 622 aa3.48□□□□□ -1.85
PCM1-217ENST00000522998 MLXIPQ9HAP2 919 aa3.48□□□□□ -1.85
PCM1-217ENST00000522998 TRMT13Q9NUP7 481 aaKnown RBP3.48□□□□□ -1.85
PCM1-217ENST00000522998 HESX1Q9UBX0 185 aa3.48□□□□□ -1.85
PCM1-217ENST00000522998 CFAP20Q9Y6A4 193 aaKnown RBP3.48□□□□□ -1.85
PCM1-217ENST00000522998 K7ESF4 209 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 DCLK1O15075 740 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 ERC2O15083 957 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 GPR39O43194 453 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 SLC28A2O43868 658 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 CNOT3O75175 753 aaKnown RBP3.47□□□□□ -1.85
PCM1-217ENST00000522998 PRKCBP05771 671 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 FTH1P19P0C7X4 201 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 PRDX5P30044 214 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 E2F2Q14209 437 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 LONRF3Q496Y0 759 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 ANO7Q6IWH7 933 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 BCDIN3DQ7Z5W3 292 aaKnown RBP3.47□□□□□ -1.85
PCM1-217ENST00000522998 FAM90A1Q86YD7 464 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 CHAC2Q8WUX2 184 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 SOCS4Q8WXH5 440 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 NR4A3Q92570 626 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 TNPO1Q92973 898 aaKnown RBP3.47□□□□□ -1.85
PCM1-217ENST00000522998 WBP1Q96G27 269 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 ZFYVE19Q96K21 471 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 DPCDQ9BVM2 203 aaPredicted RBP3.47□□□□□ -1.85
PCM1-217ENST00000522998 ASIC5Q9NY37 505 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 ZDHHC8Q9ULC8 765 aa3.47□□□□□ -1.85
PCM1-217ENST00000522998 TCF20Q9UGU0 1960 aaKnown RBP3.46□□□□□ -1.86
PCM1-217ENST00000522998 EYA4O95677 639 aa3.46□□□□□ -1.86
PCM1-217ENST00000522998 PIM1P11309 404 aaPredicted RBP3.46□□□□□ -1.86
PCM1-217ENST00000522998 MYCLP12524 364 aaPredicted RBP3.46□□□□□ -1.86
PCM1-217ENST00000522998 THBS4P35443 961 aa3.46□□□□□ -1.86
PCM1-217ENST00000522998 LILRA4P59901 499 aa3.46□□□□□ -1.86
PCM1-217ENST00000522998 ZXDBP98169 803 aa3.46□□□□□ -1.86
PCM1-217ENST00000522998 E2F1Q01094 437 aa3.46□□□□□ -1.86
PCM1-217ENST00000522998 EGFLAMQ63HQ2 1017 aa3.46□□□□□ -1.86
PCM1-217ENST00000522998 RFX6Q8HWS3 928 aa3.46□□□□□ -1.86
PCM1-217ENST00000522998 FOXP4Q8IVH2 680 aaPredicted RBP3.46□□□□□ -1.86
PCM1-217ENST00000522998 WDR66Q8TBY9 1149 aa3.46□□□□□ -1.86
PCM1-217ENST00000522998 PNISRQ8TF01 805 aaKnown RBP3.46□□□□□ -1.86
PCM1-217ENST00000522998 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.46□□□□□ -1.86
PCM1-217ENST00000522998 LRRC14BA6NHZ5 514 aa3.45□□□□□ -1.86
PCM1-217ENST00000522998 PRSS47A8MTI9 375 aa3.45□□□□□ -1.86
PCM1-217ENST00000522998 AP4M1O00189 453 aa3.45□□□□□ -1.86
PCM1-217ENST00000522998 FXR1P51114 621 aaKnown RBP eCLIP3.45□□□□□ -1.865e-6■■■□□ 17
PCM1-217ENST00000522998 RPS13P62277 151 aaKnown RBP3.45□□□□□ -1.86
PCM1-217ENST00000522998 KIF23Q02241 960 aaPredicted RBP3.45□□□□□ -1.86
PCM1-217ENST00000522998 IQCB1Q15051 598 aa3.45□□□□□ -1.86
PCM1-217ENST00000522998 ASIC2Q16515 512 aa3.45□□□□□ -1.86
PCM1-217ENST00000522998 C4orf46Q504U0 113 aa3.45□□□□□ -1.86
PCM1-217ENST00000522998 GFI1BQ5VTD9 330 aa3.45□□□□□ -1.86
PCM1-217ENST00000522998 PGM2L1Q6PCE3 622 aa3.45□□□□□ -1.86
PCM1-217ENST00000522998 CPA6Q8N4T0 437 aa3.45□□□□□ -1.86
PCM1-217ENST00000522998 MPLKIPQ8TAP9 179 aa3.45□□□□□ -1.86
PCM1-217ENST00000522998 ZBTB40Q9NUA8 1239 aa3.45□□□□□ -1.86
PCM1-217ENST00000522998 NDRG4Q9ULP0 352 aaKnown RBP3.45□□□□□ -1.86
PCM1-217ENST00000522998 LOC105371045A0A1W2PR82 267 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 IFITM10A6NMD0 228 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 ARIH2O95376 493 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 CTSAP10619 480 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 PDE6CP51160 858 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 DSC2Q02487 901 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 CFHR1Q03591 330 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 CYP1B1Q16678 543 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 C9orf50Q5SZB4 431 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 TMTC4Q5T4D3 741 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 DEPDC1Q5TB30 811 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 SFTPA1Q8IWL2 248 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 MMP21Q8N119 569 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 C3orf20Q8ND61 904 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 B4GALNT2Q8NHY0 566 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 COA7Q96BR5 231 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 TMEM204Q9BSN7 226 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 TMX1Q9H3N1 280 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 WDCPQ9H6R7 721 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 MRPL44Q9H9J2 332 aaKnown RBP3.44□□□□□ -1.86
PCM1-217ENST00000522998 MKS1Q9NXB0 559 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 MCM8Q9UJA3 840 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 POLHQ9Y253 713 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 PCDHA3Q9Y5H8 950 aa3.44□□□□□ -1.86
PCM1-217ENST00000522998 NGFRP08138 427 aa3.43□□□□□ -1.86
PCM1-217ENST00000522998 PHKG2P15735 406 aa3.43□□□□□ -1.86
PCM1-217ENST00000522998 AWAT1Q58HT5 328 aa3.43□□□□□ -1.86
PCM1-217ENST00000522998 RNF219Q5W0B1 726 aaPredicted RBP3.43□□□□□ -1.86
PCM1-217ENST00000522998 DPY19L3Q6ZPD9 716 aa3.43□□□□□ -1.86
PCM1-217ENST00000522998 CAND1Q86VP6 1230 aaKnown RBP3.43□□□□□ -1.86
PCM1-217ENST00000522998 LIX1LQ8IVB5 337 aa3.43□□□□□ -1.86
PCM1-217ENST00000522998 OSCP1Q8WVF1 389 aa3.43□□□□□ -1.86
PCM1-217ENST00000522998 DNASE2BQ8WZ79 361 aa3.43□□□□□ -1.86
PCM1-217ENST00000522998 ZNF479Q96JC4 524 aa3.43□□□□□ -1.86
PCM1-217ENST00000522998 FAM84BQ96KN1 310 aaPredicted RBP3.43□□□□□ -1.86
PCM1-217ENST00000522998 PRR25Q96S07 402 aa3.43□□□□□ -1.86
PCM1-217ENST00000522998 MEIS3Q99687 375 aa3.43□□□□□ -1.86
PCM1-217ENST00000522998 MRPL46Q9H2W6 279 aaKnown RBP3.43□□□□□ -1.86
PCM1-217ENST00000522998 AMFRQ9UKV5 643 aa3.43□□□□□ -1.86
PCM1-217ENST00000522998 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.43□□□□□ -1.86
PCM1-217ENST00000522998 IGLV5-39A0A0G2JS06 123 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms