RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 FAM43BQ6ZT52 329 aaPredicted RBP16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 CLEC20AQ6ZU45 233 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 ADAT2Q7Z6V5 191 aaKnown RBP16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 TMCO2Q7Z6W1 182 aaPredicted RBP16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 PIGZQ86VD9 579 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 THEM5Q8N1Q8 247 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 ACBD6Q9BR61 282 aa16.26■□□□□ 0.19
CTNNA1-236ENST00000522792 ARHGEF37A1IGU5 675 aa16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 AP1G2O75843 785 aa16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 EN2P19622 333 aaPredicted RBP16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 TYMPP19971 482 aa16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 PLA2G4AP47712 749 aa16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 CACNA2D1P54289 1103 aa16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 SLC8A3P57103 927 aa16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 MRPS25P82663 173 aaKnown RBP16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 PLCB3Q01970 1234 aa16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 PIGHQ14442 188 aaPredicted RBP16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 LLGL1Q15334 1064 aa16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 LONRF2Q1L5Z9 754 aa16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 SEL1L2Q5TEA6 688 aa16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 TRNP1Q6NT89 227 aa16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 SPATA18Q8TC71 538 aa16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 MRPL9Q9BYD2 267 aaKnown RBP16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 MCOLN1Q9GZU1 580 aa16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 TMLHEQ9NVH6 421 aa16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 KLHL11Q9NVR0 708 aa16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 MARCH5Q9NX47 278 aa16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 KIAA0100Q14667 2235 aaKnown RBP16.25■□□□□ 0.19
CTNNA1-236ENST00000522792 KIAA0355O15063 1070 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 ALDH2P05091 517 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 ACRP10323 421 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 SLC6A3Q01959 620 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 FAM117BQ6P1L5 589 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 LRRTM3Q86VH5 581 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 CEP57Q86XR8 500 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 RHOT1Q8IXI2 618 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 B3GALT6Q96L58 329 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 SMOQ99835 787 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 ANKZF1Q9H8Y5 726 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 TMEM30AQ9NV96 361 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 ADAM28Q9UKQ2 775 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 FAN1Q9Y2M0 1017 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 FNDC1Q4ZHG4 1894 aaPredicted RBP16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 TRAPPC3O43617 180 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 OR4Q2P0C623 313 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 FLT3P36888 993 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 SNX16P57768 344 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 ITIH3Q06033 890 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 ADIGQ0VDE8 80 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 LRRC43Q8N309 656 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 GPR161Q8N6U8 529 aaKnown RBP16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 NIPA2Q8N8Q9 360 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 RXFP2Q8WXD0 754 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 KCNK16Q96T55 309 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 COLEC11Q9BWP8 271 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 LCMT1Q9UIC8 334 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 TMEM59LQ9UK28 342 aa16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.24■□□□□ 0.19
CTNNA1-236ENST00000522792 KRIT1O00522 736 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 PSTPIP1O43586 416 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 GPD1P21695 349 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 ACADSBP45954 432 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 RPL34P49207 117 aaKnown RBP16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 DEFB103AP81534 67 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 TSPY1Q01534 308 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 ATP13A4Q4VNC1 1196 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 FAM171A1Q5VUB5 890 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 FAM171BQ6P995 826 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 TMEM173Q86WV6 379 aaPredicted RBP16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 KLHL7Q8IXQ5 586 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 MMGT1Q8N4V1 131 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 FNIP1Q8TF40 1166 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 NDRG1Q92597 394 aaKnown RBP16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 ACSF2Q96CM8 615 aaPredicted RBP16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 HSFY1Q96LI6 401 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 PKMYT1Q99640 499 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 GPR62Q9BZJ7 368 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 C2CD4BA6NLJ0 364 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 GALTP07902 379 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 PDGFRAP16234 1089 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 BDNFP23560 247 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 C15orf59Q2T9L4 293 aaPredicted RBP16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 ZFYVE27Q5T4F4 411 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 TXNRD3NBQ6F5E7 133 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 ZDHHC17Q8IUH5 632 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 ARFGAP1Q8N6T3 406 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 ZMIZ2Q8NF64 920 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 ANKRD7Q92527 254 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 KHSRPQ92945 711 aaKnown RBP eCLIP16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 SMARCD1Q96GM5 515 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 KRT12Q99456 494 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 LRRC1Q9BTT6 524 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 LRRC4Q9HBW1 653 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 TTC7AQ9ULT0 858 aaPredicted RBP16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 NR2E1Q9Y466 385 aa16.23■□□□□ 0.19
CTNNA1-236ENST00000522792 ABHD14A-ACY1A0A1B0GW23 586 aa16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 LRCH4O75427 683 aa16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 DGKIO75912 1065 aa16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 NDUFV1P49821 464 aa16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 TUBB4BP68371 445 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms