RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 NDRG1Q92597 394 aaKnown RBP13.08□□□□□ -0.32
PABPC1-219ENST00000522387 HERC2P3Q9BVR0 1158 aa13.08□□□□□ -0.32
PABPC1-219ENST00000522387 PRDM12Q9H4Q4 367 aa13.08□□□□□ -0.32
PABPC1-219ENST00000522387 NAGPAQ9UK23 515 aa13.08□□□□□ -0.32
PABPC1-219ENST00000522387 RWDD3Q9Y3V2 267 aa13.08□□□□□ -0.32
PABPC1-219ENST00000522387 DAAM1Q9Y4D1 1078 aa13.08□□□□□ -0.32
PABPC1-219ENST00000522387 BZW2Q9Y6E2 419 aaKnown RBP13.08□□□□□ -0.32
PABPC1-219ENST00000522387 C2orf71A6NGG8 1288 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 C5orf67F2Z3F1 127 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 H7C4K7 107 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 MED7O43513 233 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 CNGA2Q16280 664 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 SLC18A3Q16572 532 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 ASTE1Q2TB18 679 aaPredicted RBP13.07□□□□□ -0.32
PABPC1-219ENST00000522387 CLEC20AQ6ZU45 233 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 PKMYT1Q99640 499 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 C11orf70Q9BRQ4 267 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 SYT11Q9BT88 431 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 PLVAPQ9BX97 442 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 MIS12Q9H081 205 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 IGFLR1Q9H665 355 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 CYP4F11Q9HBI6 524 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 MTMR11A4FU01 709 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 ERICH4A6NGS2 130 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 TBC1D4O60343 1298 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 SEC31AO94979 1220 aaKnown RBP13.07□□□□□ -0.32
PABPC1-219ENST00000522387 GJB6O95452 261 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 VNN2O95498 520 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 FTLP02792 175 aaPredicted RBP13.07□□□□□ -0.32
PABPC1-219ENST00000522387 LCP1P13796 627 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 GPD2P43304 727 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 LCLAT1Q6UWP7 414 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 MMS22LQ6ZRQ5 1243 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 GPRIN1Q7Z2K8 1008 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 DCP1BQ8IZD4 617 aaKnown RBP13.07□□□□□ -0.32
PABPC1-219ENST00000522387 MRPL43Q8N983 215 aaKnown RBP13.07□□□□□ -0.32
PABPC1-219ENST00000522387 FEZF2Q8TBJ5 459 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 GIPC2Q8TF65 315 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 CPXM1Q96SM3 734 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 SYNCQ9H7C4 482 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 MYO1AQ9UBC5 1043 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 DUSP10Q9Y6W6 482 aa13.07□□□□□ -0.32
PABPC1-219ENST00000522387 OR6C75A6NL08 312 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 TGM5O43548 720 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 SEC24AO95486 1093 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 FAM200BP0CF97 657 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 PAX3P23760 479 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 NSFP46459 744 aaKnown RBP13.06□□□□□ -0.32
PABPC1-219ENST00000522387 NDUFV1P49821 464 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 NOMO3P69849 1222 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 ZNF697Q5TEC3 545 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 SLC8B1Q6J4K2 584 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 SCUBE3Q8IX30 993 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 SCAMP5Q8TAC9 235 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 ZNF461Q8TAF7 563 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 HNRNPABQ99729 332 aaKnown RBP13.06□□□□□ -0.32
PABPC1-219ENST00000522387 SMOQ99835 787 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 REXO2Q9Y3B8 237 aaKnown RBP13.06□□□□□ -0.32
PABPC1-219ENST00000522387 SSU72P8A0A1W2PR75 194 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 RCCD1A6NED2 376 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 PRRG1O14668 218 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 LILRB3O75022 631 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 RB1P06400 928 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 NPR3P17342 541 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 CYLC1P35663 651 aaPredicted RBP13.06□□□□□ -0.32
PABPC1-219ENST00000522387 SMAD3P84022 425 aaKnown RBP13.06□□□□□ -0.32
PABPC1-219ENST00000522387 GPR17Q13304 367 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 MAPK8IP2Q13387 824 aaPredicted RBP13.06□□□□□ -0.32
PABPC1-219ENST00000522387 MTMR3Q13615 1198 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 SPA17Q15506 151 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 PIGZQ86VD9 579 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 FMNL3Q8IVF7 1028 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 MICALL1Q8N3F8 863 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 ANKRD52Q8NB46 1076 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 ZMIZ2Q8NF64 920 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 CLEC4CQ8WTT0 213 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 SMARCD1Q96GM5 515 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 DUSP16Q9BY84 665 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 THAP2Q9H0W7 228 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 EPC1Q9H2F5 836 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 TTYH1Q9H313 450 aaPredicted RBP13.06□□□□□ -0.32
PABPC1-219ENST00000522387 MAGED2Q9UNF1 606 aaPredicted RBP13.06□□□□□ -0.32
PABPC1-219ENST00000522387 CEP83Q9Y592 693 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 PCDHB5Q9Y5E4 795 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 MRFAP1Q9Y605 127 aa13.06□□□□□ -0.32
PABPC1-219ENST00000522387 E5RJQ4 531 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 GRAP2O75791 330 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 IPO7O95373 1038 aaKnown RBP13.05□□□□□ -0.32
PABPC1-219ENST00000522387 UNGP13051 313 aaPredicted RBP13.05□□□□□ -0.32
PABPC1-219ENST00000522387 RNASE9P60153 205 aaKnown RBP13.05□□□□□ -0.32
PABPC1-219ENST00000522387 CDK17Q00537 523 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 SMC1AQ14683 1233 aaKnown RBP13.05□□□□□ -0.32
PABPC1-219ENST00000522387 GRIN2CQ14957 1233 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 CLEC16AQ2KHT3 1053 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 PTPN20Q4JDL3 420 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 ZNF569Q5MCW4 686 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 TEX35Q5T0J7 233 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 C4orf50Q6ZRC1 276 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 EP400NLQ6ZTU2 488 aa13.05□□□□□ -0.32
PABPC1-219ENST00000522387 ZNF677Q86XU0 584 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms