RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 GOLGA7BQ2TAP0 167 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 PRUNE1Q86TP1 453 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 ATPAF2Q8N5M1 289 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 KAT2BQ92831 832 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 TAS2R14Q9NYV8 317 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.36□□□□□ -0.11
SYNPO-205ENST00000522122 FOXD4Q12950 439 aaPredicted RBP14.36□□□□□ -0.11
SYNPO-205ENST00000522122 SETD3Q86TU7 594 aaPredicted RBP14.36□□□□□ -0.11
SYNPO-205ENST00000522122 CYP2W1Q8TAV3 490 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 URGCPQ8TCY9 931 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 CEP19Q96LK0 163 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 NAALADL1Q9UQQ1 740 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 SNX3O60493 162 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 PTGER2P43116 358 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 JAM2P57087 298 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 ABCE1P61221 599 aaKnown RBP14.36□□□□□ -0.11
SYNPO-205ENST00000522122 OTOP1Q7RTM1 612 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 GCNAQ96QF7 691 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 FGFBP2Q9BYJ0 223 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 MTMR12Q9C0I1 747 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 DNAJC18Q9H819 358 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 MYOZ2Q9NPC6 264 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 DLGAP2Q9P1A6 1054 aa14.36□□□□□ -0.11
SYNPO-205ENST00000522122 CYP2C8P10632 490 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 TCF7P36402 384 aaPredicted RBP14.35□□□□□ -0.11
SYNPO-205ENST00000522122 ANGEL2Q5VTE6 544 aaKnown RBP14.35□□□□□ -0.11
SYNPO-205ENST00000522122 TAS2R42Q7RTR8 314 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 SAMD3Q8N6K7 520 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 ASPSCR1Q9BZE9 553 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 SLC24A2Q9UI40 661 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 PKD1L3Q7Z443 1732 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 E2F8A0AVK6 867 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 E7ENQ6 273 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 SLC25A27O95847 323 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 CYP1A2P05177 515 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 CACNB2Q08289 660 aaPredicted RBP14.35□□□□□ -0.11
SYNPO-205ENST00000522122 ANO4Q32M45 955 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 PRAMEF18Q5VWM3 479 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 TMEM121Q9BTD3 319 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 NEUROG2Q9H2A3 272 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 DYNC1LI2O43237 492 aaPredicted RBP14.35□□□□□ -0.11
SYNPO-205ENST00000522122 DNAJC6O75061 913 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 GYS1P13807 737 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 ALDH5A1P51649 535 aaPredicted RBP14.35□□□□□ -0.11
SYNPO-205ENST00000522122 C1orf186Q6ZWK4 172 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 PCYOX1LQ8NBM8 494 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 AGBL3Q8NEM8 1001 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 ELMO2Q96JJ3 720 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 EIF2AQ9BY44 585 aaKnown RBP14.35□□□□□ -0.11
SYNPO-205ENST00000522122 CCDC134Q9H6E4 229 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 TJP2Q9UDY2 1190 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 MYH7P12883 1935 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 RRP1BQ14684 758 aaKnown RBP14.35□□□□□ -0.11
SYNPO-205ENST00000522122 TBCCQ15814 346 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 NFIL3Q16649 462 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 ARSHQ5FYA8 562 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 SPOCD1Q6ZMY3 1216 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 ETNPPLQ8TBG4 499 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 CKAP2Q8WWK9 683 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 CGRRF1Q99675 332 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 DDX4Q9NQI0 724 aaKnown RBP14.35□□□□□ -0.11
SYNPO-205ENST00000522122 SLC13A4Q9UKG4 626 aa14.35□□□□□ -0.11
SYNPO-205ENST00000522122 PAEPP09466 180 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 ACADSP16219 412 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 WASHC2DQ5SRD0 308 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 AADACL2Q6P093 401 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 SLC7A14Q8TBB6 771 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 ASIC4Q96FT7 647 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 PAFAH2Q99487 392 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 NDFIP2Q9NV92 336 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 PIK3CDO00329 1044 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 EML1O00423 815 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 RARRES1P49788 294 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 COPAP53621 1224 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 NOP9Q86U38 636 aaKnown RBP14.34□□□□□ -0.11
SYNPO-205ENST00000522122 CALML6Q8TD86 181 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 KIAA1257Q9ULG3 409 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 CDYLQ9Y232 598 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 CPB1P15086 417 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 VCAM1P19320 739 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 GNL1P36915 607 aaPredicted RBP14.34□□□□□ -0.11
SYNPO-205ENST00000522122 FDFT1P37268 417 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 GRIK1P39086 918 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 KCNA1Q09470 495 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 LBRQ14739 615 aaKnown RBP14.34□□□□□ -0.11
SYNPO-205ENST00000522122 RCN1Q15293 331 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 NAPEPLDQ6IQ20 393 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 SPATA2LQ8IUW3 424 aaPredicted RBP14.34□□□□□ -0.11
SYNPO-205ENST00000522122 PRELID2Q8N945 189 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 TFB1MQ8WVM0 346 aaKnown RBP14.34□□□□□ -0.11
SYNPO-205ENST00000522122 TRIM54Q9BYV2 358 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 SLC39A10Q9ULF5 831 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 TMEM247A6NEH6 219 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 SNHG28P0DPA3 235 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 TMEM62Q0P6H9 643 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 MTFR1Q15390 333 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 ACTL9Q8TC94 416 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 PABPC5Q96DU9 382 aaKnown RBP14.34□□□□□ -0.11
SYNPO-205ENST00000522122 RPS6KL1Q9Y6S9 549 aa14.34□□□□□ -0.11
SYNPO-205ENST00000522122 NFIBO00712 420 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms