RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 PCDHGA5Q9Y5G8 931 aa5.6□□□□□ -1.51
CTNNA1-232ENST00000522013 COL12A1Q99715 3063 aa5.6□□□□□ -1.51
CTNNA1-232ENST00000522013 SPTAN1Q13813 2472 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 ZNF638Q14966 1978 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 GSTTP1A0A1W2PQM5 241 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 GCOM1H8Y6P7 765 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 K7ESF4 209 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 SIGLEC6O43699 453 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 CAVIN2O95810 425 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 VTNP04004 478 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 SCG5P05408 212 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 GALTP07902 379 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 POLR2MP0CAP2 368 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 ATP5JP18859 108 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 HOXC13P31276 330 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 ECI1P42126 302 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 CTSKP43235 329 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 GABREP78334 506 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 MRPS9P82933 396 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 NUCB1Q02818 461 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 MAP7Q14244 749 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 DPY19L1Q2PZI1 675 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 TSHZ3Q63HK5 1081 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 Q6ZS52 159 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 WDR5BQ86VZ2 330 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 CHD1LQ86WJ1 897 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 TMEFF1Q8IYR6 380 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 ZNF843Q8N446 348 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 GIMAP8Q8ND71 665 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 GAB3Q8WWW8 586 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 KCTD13Q8WZ19 329 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 LPPQ93052 612 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 UTP4Q969X6 686 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 SCLT1Q96NL6 688 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 INPP4AQ96PE3 977 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 FAM193BQ96PV7 902 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 AMNQ9BXJ7 453 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 NRDE2Q9H7Z3 1164 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 BRD9Q9H8M2 597 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 RBM12Q9NTZ6 932 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 TBC1D13Q9NVG8 400 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 ZDHHC7Q9NXF8 308 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 NOP53Q9NZM5 478 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 DNAJB4Q9UDY4 337 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 SSX2IPQ9Y2D8 614 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 DOPEY1Q5JWR5 2465 aa5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 MUC22E2RYF6 1773 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-232ENST00000522013 MYO16Q9Y6X6 1858 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 SALL3Q9BXA9 1300 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 H0Y626 953 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 ARNTLO00327 626 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 CAPN9O14815 690 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 CCL16O15467 120 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 RNF113AO15541 343 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 STAM2O75886 525 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 TRIM16O95361 564 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 CBX7O95931 251 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 FAM87AP0C7U9 286 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 SNHG28P0DPA3 235 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 POU3F2P20265 443 aaPredicted RBP5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 MX1P20591 662 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 CCNE1P24864 410 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 KLRC1P26715 233 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 HOXC12P31275 282 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 NOVP48745 357 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 GLUD2P49448 558 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 EXOSC10Q01780 885 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 SCRN1Q12765 414 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 LRRC32Q14392 662 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 ELF2Q15723 593 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 CRTC3Q6UUV7 619 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 GLB1LQ6UWU2 654 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 FAM43BQ6ZT52 329 aaPredicted RBP5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 USP53Q70EK8 1073 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 NLRX1Q86UT6 975 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 FAM20CQ8IXL6 584 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 SHISA5Q8N114 240 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 ITFG1Q8TB96 612 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 PIP4K2CQ8TBX8 421 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 SPATA18Q8TC71 538 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 DNASE1L2Q92874 299 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 PTPRN2Q92932 1015 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 ZNF668Q96K58 619 aaPredicted RBP5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 RPS6KC1Q96S38 1066 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 SEC62Q99442 399 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 SENP7Q9BQF6 1050 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 DSCC1Q9BVC3 393 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 YIPF2Q9BWQ6 316 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 PLA2G2FQ9BZM2 168 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 PLEKHA4Q9H4M7 779 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 C2orf42Q9NWW7 574 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 MAP3K20Q9NYL2 800 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 PRR13Q9NZ81 148 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 STK39Q9UEW8 545 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 MCM8Q9UJA3 840 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 PIAS3Q9Y6X2 628 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 PTPRQQ9UMZ3 2332 aa5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 TNRC6BQ9UPQ9 1833 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-232ENST00000522013 TTC41PQ6P2S7 1318 aa5.57□□□□□ -1.52
CTNNA1-232ENST00000522013 A0A0U1RQF3 1178 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms