RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 NUP93Q8N1F7 819 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 CERS5Q8N5B7 392 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 SMYD1Q8NB12 490 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 MZB1Q8WU39 189 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 SHC3Q92529 594 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 ACAP3Q96P50 834 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 PHF12Q96QT6 1004 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 FIZ1Q96SL8 496 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 MRPL1Q9BYD6 325 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 SEL1LQ9UBV2 794 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 MARCOQ9UEW3 520 aaPredicted RBP10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 STRIP2Q9ULQ0 834 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 SHOC2Q9UQ13 582 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 PCDHAC2Q9Y5I4 1007 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 IKBKGQ9Y6K9 419 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 GAKO14976 1311 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 UBE4BO95155 1302 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 CAPN8A6NHC0 703 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 FAM86B1E9PN63 330 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 FAM86B2P0C5J1 330 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 KRT10P13645 584 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 ZFXP17010 805 aaPredicted RBP10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 VARSP26640 1264 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 SHMT1P34896 483 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 SCNN1DP51172 638 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 AQP5P55064 265 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 RPL26P61254 145 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 TMPRSS15P98073 1019 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 MTM1Q13496 603 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 TLR1Q15399 786 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 TBCCQ15814 346 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 MYLK3Q32MK0 819 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 RNASEH2BQ5TBB1 312 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 FAM196AQ6ZSG2 479 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 PALM2Q8IXS6 379 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 FNDC8Q8TC99 324 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 DCAKDQ8WVC6 231 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 APOPT1Q96IL0 206 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 FAM20AQ96MK3 541 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 CCDC106Q9BWC9 280 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 RBM38Q9H0Z9 239 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 PIF1Q9H611 641 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 ACSS3Q9H6R3 686 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 KCNQ5Q9NR82 932 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 FAF1Q9UNN5 650 aaPredicted RBP10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 SSX2IPQ9Y2D8 614 aa10.03□□□□□ -0.8
CTNNA1-230ENST00000521724 IQANK1A0A1B0GTG1 560 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 BOLA2-SMG1P6H3BVE0 249 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 IPO5O00410 1097 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 PSTPIP1O43586 416 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 PDE5AO76074 875 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 IL1BP01584 269 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 RAG1P15918 1043 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 FDFT1P37268 417 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 CD151P48509 253 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 PHEXP78562 749 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 BTKQ06187 659 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 PTP4A2Q12974 167 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 HSF5Q4G112 596 aaPredicted RBP10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 LLGL2Q6P1M3 1020 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 C15orf52Q6ZUT6 534 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 ANO5Q75V66 913 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 RHPN2Q8IUC4 686 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 ALLCQ8N6M5 410 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 MRPS26Q9BYN8 205 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 Q9H521 79 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 C17orf75Q9HAS0 396 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 KLHL11Q9NVR0 708 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 GGA1Q9UJY5 639 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 MYH9P35579 1960 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 NHSQ6T4R5 1651 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 TISP43B9A030 160 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 PI4K2BG5E9Z4 385 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 SGK1O00141 431 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 KLF11O14901 512 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 PROSCO94903 275 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 SLITRK3O94933 977 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 CPOXP36551 454 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 TAS2R40P59535 323 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 NFIAQ12857 509 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 PTK7Q13308 1070 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 UBAP2LQ14157 1087 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 KRT81Q14533 505 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 CLEC16AQ2KHT3 1053 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 GPATCH4Q5T3I0 446 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 KATNAL2Q8IYT4 538 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 ALDH16A1Q8IZ83 802 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 MCOLN2Q8IZK6 566 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 MARVELD2Q8N4S9 558 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 EXD1Q8NHP7 514 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 CYP2W1Q8TAV3 490 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 CPA5Q8WXQ8 436 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 JADE3Q92613 823 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 USP6NLQ92738 828 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 SLC35B4Q969S0 331 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 LENG9Q96B70 501 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 SERAC1Q96JX3 654 aa10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 PRPF18Q99633 342 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-230ENST00000521724 DHRS4Q9BTZ2 278 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms